Training materials
Licence: Creative Commons Attribution 4.0 International
and Authors: Delphine Lariviere
and Contributors: Delphine Lariviere
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e-learning
Decontamination of a genome assembly
• beginnerSequence assembly Assembly -
e-learning
ERGA post-assembly QC
• beginnerSequence assembly Assembly QC animals assembly genome plants -
e-learning
Essential genes detection with Transposon insertion sequencing
• beginnerGenomics Microbiology Sequence analysis Mobile genetic elements Genome Annotation bacteria essential genes microgalaxy tnseq -
e-learning
Vertebrate genome assembly using HiFi, Bionano and Hi-C data - Step by Step
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
e-learning
Using the VGP workflows to assemble a vertebrate genome with HiFi and Hi-C data
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
e-learning
Unicycler Assembly
• beginnerSequence assembly Genomics Microbiology Assembly microgalaxy prokaryote -
e-learning
Use Jupyter notebooks in Galaxy
• beginnerUsing Galaxy and Managing your Data -
slides
Essential genes detection with Transposon insertion sequencing
• beginnerGenome Annotation bacteria essential genes tnseq -
slides
Unicycler Assembly
• beginnerSequence assembly Assembly prokaryote