slides

Unicycler Assembly

Abstract

Small Genome Assembly With Unicycler

Questions this will address

  • I have short reads and long reads. How do I assemble a genome?

Learning Objectives

  • Perform Quality Control on your reads
  • Perform a Small genome Assembly with Unicycler
  • Evaluate the Quality of the Assembly with Quast
  • Annotate the assembly with Prokka

Licence: Creative Commons Attribution 4.0 International

Keywords: Assembly, prokaryote

Target audience: Students

Resource type: slides

Version: 9

Status: Active

Prerequisites:

  • Introduction to Galaxy Analyses
  • Quality Control

Learning objectives:

  • Perform Quality Control on your reads
  • Perform a Small genome Assembly with Unicycler
  • Evaluate the Quality of the Assembly with Quast
  • Annotate the assembly with Prokka

Date modified: 2022-10-18

Date published: 2017-10-11

Authors: Anton Nekrutenko, Delphine Lariviere, Simon Gladman

Contributors: Anton Nekrutenko, Delphine Lariviere, Simon Gladman

Scientific topics: Sequence assembly


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