Training materials
Tools: Biopython
and Scientific topics: Transcriptomics
and Related resources: Associated Training Datasets
3 materials found
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Scientific topic
- Transcriptomics
- Comparative transcriptomics3
- Transcriptome3
- Bottom-up proteomics1
- Computational ecology1
- Discovery proteomics1
- Ecoinformatics1
- Ecological informatics1
- Ecology1
- Ecosystem science1
- MS-based targeted proteomics1
- MS-based untargeted proteomics1
- Metaproteomics1
- Peptide identification1
- Protein and peptide identification1
- Proteomics1
- Quantitative proteomics1
- Targeted proteomics1
- Top-down proteomics1
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Tool
- Biopython
- Galaxy36
- STAR7
- FastQC6
- SAMtools6
- MultiQC5
- RSeQC5
- SCANPY5
- Cutadapt4
- HISAT24
- BEDTools3
- GOseq3
- Salmon3
- pyGenomeTracks3
- DeepTools2
- DropletUtils2
- FeatureCounts2
- Heinz2
- IsoformSwitchAnalyzeR2
- PfamScan2
- StringTie2
- Targetfinder.org2
- Trimmomatic2
- annotatemyids2
- fastp2
- gffcompare2
- gffread2
- ggplot22
- miRDeep22
- rnaQUAST2
- Alevin1
- ChiRA1
- DESeq21
- EGSEA1
- GOEnrichment1
- MEME1
- MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC1
- Peakachu1
- R1
- RCAS1
- SRA Software Toolkit1
- Subread1
- Trinity1
- UMI-tools1
- blockbuster1
- fgsea1
- limma1
- pathview1
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Content provider
- GTN3
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Difficulty level
- Beginner3
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Target audience
- Students3
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Resource type
- e-learning2
- slides1
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Related resource
- Associated Training Datasets
- Associated Workflows2
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