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• • Scientific topic
  • Data management172
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• • Operation
  • Data handling48
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  • Alignment1
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  • Functional genome annotation1
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• • Tool
  • Bioconductor23
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  • AlphaFold 21
  • BEDTools1
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• • Standard database or policy
  • FAIRsharing6
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  • DisProt2
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  • STRING: functional protein association networks2
  • Search Tool for Interactions of Chemicals2
  • eNanoMapper Ontology2
  • Wheat Data Interoperability Guidelines 1
  • BRENDA1
  • Bioschemas1
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  • Chemical Entities of Biological Interest1
  • Common Workflow Language1
  • Crop Ontology1
  • Datanator1
  • FAIR sharing1
  • FAIRtracks1
  • Gene3D1
  • Genomics England | PanelApp1
  • HumanMine1
  • IUPAC International Chemical Identifier1
  • Identifiers.org Registry1
  • Integrated resource of protein families, domains and functional sites1
  • MDL molfile Format1
  • Multi-Crop Passport Descriptors1
  • OMOP Common Data Model1
  • Observational Medical Outcomes Partnership Standard Vocabulary1
  • PRINTS1
  • Plant Phenotype Experiment Ontology1
  • Resource Identification Portal 1
  • SUPERFAMILY1
  • Schema.org1
  • Simplified Molecular Input Line Entry Specification Format1
  • Stress Knowledge Map1
  • Structural Classification Of Proteins1
  • The FAIR Principles1
  • The Human Metabolome Database1
  • Wheat Trait Ontology1
  • Wikidata1
  • data.eNanoMapper.net1
  • i2b2-patient_visit_dimensions1
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• • Content provider
  • Glittr.org664
  • GTN564
  • European Bioinformatics Institute (EBI)410
  • Galaxy Training112
  • GOBLET108
  • SIB Swiss Institute of Bioinformatics92
  • ELXIR-UK DaSH70
  • Software Carpentry70
  • Australian BioCommons44
  • DTLS - Dutch Techcentre For Life Sciences41
  • Bioinformatics and Biomathematics Training Hub39
  • de.NBI35
  • BY-COVID31
  • Khan Academy Statistics29
  • VIB Training27
  • IFB French Institute of Bioinformatics26
  • Bioconductor24
  • Coursera19
  • ELIXIR Portugal18
  • CINECA PROJECT17
  • ELIXIR13
  • CSC - IT Center for Science12
  • PerMedCoE12
  • NBIS11
  • eNanoMapper10
  • Bioschemas9
  • Data Carpentry9
  • NanoCommons9
  • Barcelona Supercomputing Center (BSC)8
  • Genome 3D8
  • Department of Bioinformatics - BiGCaT, Maastricht University7
  • ELIXIR Estonia7
  • InterMine7
  • Data Steward team Ghent University6
  • ELIXIR Luxembourg6
  • ELIXIR Norway6
  • ELIXIR-SI eLearning Platform (EeLP)6
  • BioData.pt5
  • ELIXIR Slovenia5
  • LIPID MAPS5
  • UNIVERSE-HPC project5
  • COG-Train4
  • Centre for Genomic Regulation (CRG)4
  • Danish National Health Data Science Sandbox4
  • Proteomics Academy4
  • University of Cambridge Bioinformatics Training4
  • ELIXIR: The Czech Republic Node3
  • Novo Nordisk Foundation Center for Protein Research3
  • ELIXIR AAI2
  • Software Sustainability Institute2
  • The Carpentries2
  • University of Edinburgh2
  • Biomedical Sciences Research Center "Alexander Fleming"1
  • Centre for Digital Life Norway1
  • Cloud-SPAN1
  • EOSC4Cancer1
  • ExCALIBUR1
  • FAIRsharing1
  • Fraunhofer FIT1
  • Future Learn1
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• • Keyword
  • R287
  • Python124
  • Transcriptomics122
  • RNA-seq85
  • Genomics79
  • Data management67
  • Next generation sequencing67
  • Bioinformatics66
  • Galaxy Server administration65
  • FAIR63
  • Statistics63
  • Machine learning57
  • FAIR data54
  • Data science53
  • Foundations of Data Science51
  • data management50
  • Single-cell sequencing49
  • Reproducibility47
  • jupyter-notebook46
  • Proteomics42
  • Workflows42
  • Unix/Linux40
  • Data visualization39
  • Single Cell37
  • microgalaxy36
  • General33
  • training33
  • Rare Diseases & Research29
  • Variant analysis29
  • Version control29
  • Development in Galaxy28
  • Data analysis26
  • Genome Annotation26
  • Metagenomics26
  • RDM26
  • Contributing to the Galaxy Training Material25
  • Microbiome25
  • Using Galaxy and Managing your Data25
  • Assembly24
  • Epigenetics24
  • data stewardship23
  • Ecology22
  • Statistics and machine learning22
  • ansible21
  • Containerization20
  • Shiny20
  • life-sciences20
  • sensitive data19
  • Docker19
  • FAIR Data, Workflows, and Research19
  • Nextflow19
  • REDCap19
  • git-gat19
  • metadata19
  • metagenomics19
  • ChIP-seq18
  • Cloud computing18
  • Programming18
  • interactive-tools18
  • Teaching and Hosting Galaxy training17
  • Variant Analysis17
  • 10x16
  • Roslin Institute16
  • Shell16
  • Climate15
  • Metabolomics15
  • Metadata15
  • Sequence analysis15
  • fair15
  • prokaryote15
  • Julia14
  • NGS14
  • gmod14
  • jbrowse114
  • Data management planning13
  • Babraham Institute13
  • EeLP13
  • Europe PMC13
  • Git13
  • High performance computing13
  • Introduction to Galaxy Analyses13
  • Ontologies13
  • Standards13
  • eLearning13
  • Clinical data12
  • ELIXIR-CONVERGE12
  • Galaxy12
  • HPC12
  • Literature search12
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  • Quarto12
  • Spatial transcriptomics12
  • bioinformatics12
  • covid1912
  • cyoa12
  • health-informatics12
  • paper-replication12
  • ATAC-seq11
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  • DMP11
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• • Difficulty level
  • Not specified1924
  • Beginner779
  • Intermediate194
  • Advanced39
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• • Licence
  • License Not Specified1634
  • Creative Commons Attribution 4.0 International877
  • Creative Commons Attribution Share Alike 4.0 International131
  • MIT License83
  • Creative Commons Attribution Non Commercial Share Alike 4.0 International33
  • Creative Commons Zero v1.0 Universal33
  • GNU General Public License v3.0 only32
  • Creative Commons Attribution Non Commercial No Derivatives 4.0 International23
  • Apache License 2.017
  • Other (Not Open)16
  • Other (Non-Commercial)15
  • BSD 3-Clause "New" or "Revised" License12
  • Creative Commons Attribution Non Commercial 4.0 International9
  • Creative Commons Attribution 1.0 Generic5
  • Artistic License 2.02
  • Creative Commons Attribution No Derivatives 4.0 International2
  • GNU Affero General Public License v3.0 only2
  • GNU General Public License v2.0 only2
  • Academic Free License v3.01
  • Creative Commons Attribution 2.0 Generic1
  • Creative Commons Attribution No Derivatives 2.0 Generic1
  • Creative Commons Attribution Non Commercial 2.0 Generic1
  • Do What The F*ck You Want To Public License1
  • Open Data Commons Attribution License v1.01
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• • Target audience
  • Students462
  • Researchers213
  • Biologists, Genomicists, Computer Scientists170
  • Post-Doctoral Fellows164
  • PhD students139
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  • Graduate students87
  • Graduate Students79
  • Instructors44
  • Life Science Researchers44
  • Novice44
  • Biologists42
  • bioinformaticians36
  • Intermediate26
  • PhD candidate26
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  • PhD candidates21
  • post-docs20
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  • Bench biologists18
  • Data Managers18
  • Academia/ Research Institution17
  • Industry17
  • Non-Profit Organisation17
  • Beginners16
  • Data Scientists16
  • Trainers16
  • life scientists16
  • Healthcare15
  • beginner bioinformaticians15
  • data stewards13
  • Computational biologists12
  • Research Scientists12
  • health professionals11
  • Biomedical Researchers11
  • Researcher in life sciences11
  • biocurators11
  • software developers, bioinformaticians11
  • Master students10
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  • Biomedical researchers9
  • PhD Students9
  • Training Designers9
  • Training instructors9
  • PhD8
  • modelers8
  • Health Care Professionals7
  • Life Scientists7
  • biologists7
  • Bioinformatician6
  • Life scientists6
  • Patient Advocates 6
  • data managers6
  • rare disease patients representatives5
  • Chemists5
  • Clinical Scientists5
  • General Interest5
  • Post Docs5
  • Researcher5
  • Undergraduate students5
  • computational scientists5
  • plant researchers5
  • postgrad5
  • project manager5
  • Anyone wishing to use bioinformatics resources to find basic information about a virus.4
  • Beginner4
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  • Data stewards4
  • Laboratory technicians4
  • PI4
  • Veterinarians4
  • postdocs4
  • postdoctoral researchers4
  • researchers4
  • Biologists with little or no prior computational experience3
  • Database users3
  • Life scientists with programming skills3
  • Ontologists3
  • Postgraduate students3
  • Technicians3
  • data steward / data manager3
  • geneticists3
  • medical students3
  • postdoc3
  • programmers3
  • research software engineers and researchers writing code3
  • software engineers3
  • teachers3
  • Anyone interested in data standardization and/or the ontology approach (i.e. public, end users).2
  • Anyone interested in simulation of metabolic models, and in PerMedCoE tools and activities2
  • Beginner informatics2
  • General Physicians2
  • PhD Scholars, Graduates and Post Graduates, Professors, Associate Professors, Assistant Professors, Bio instruments Professionals, Bio-informatics Professionals, Directors, CEO’s of Organizations, Supply Chain companies, Manufacturing Companies, Software development companies, Research Institutes and members2
  • Policy makers2
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• • Author
  • Helena Rasche125
  • Bérénice Batut93
  • SIB Swiss Institute of Bioinformatics73
  • Saskia Hiltemann62
  • carpentries-incubator46
  • Björn Grüning44
  • Simon Gladman33
  • Anton Nekrutenko28
  • Anthony Bretaudeau27
  • Nate Coraor27
  • The Gulbenkian Training Programme in Bioinformatics27
  • bebatut27
  • Nicola Soranzo25
  • bgruening25
  • Saskia Lawson-Tovey24
  • The Carpentries23
  • Michelle Brazas21
  • Yvan Le Bras21
  • Fotis E. Psomopoulos20
  • NBIS - National Bioinformatics Infrastructure Sweden20
  • Wendi Bacon20
  • posit-conf-202320
  • Katarzyna Kamieniecka19
  • Subina Mehta19
  • Bazante Sanders18
  • Egon Willighagen18
  • Krzysztof Poterlowicz18
  • Laura Cooper18
  • Terri Attwood18
  • UC Davis Bioinformatics Core Training Page18
  • Anne Fouilloux17
  • Mehmet Tekman17
  • Teaching materials at the Harvard Chan Bioinformatics Core17
  • posit::conf(2024)17
  • Data Carpentry16
  • Cristóbal Gallardo15
  • Martin Morgan15
  • Maria Doyle14
  • Marie Josse14
  • Pratik Jagtap14
  • Sergio Martínez Cuesta14
  • bioinformatics.ca14
  • CRUK CI Bioinformatics Core13
  • Dave Clements13
  • Donny Vrins13
  • Julia Jakiela13
  • Mijke Jetten13
  • Monique Zahn13
  • shiltemann13
  • Andrew Mason12
  • Celia van Gelder12
  • Delphine Lariviere12
  • Marius van den Beek12
  • Melanie Föll12
  • Patricia Palagi12
  • Personalized Health Informatics Group12
  • Simon Andrews12
  • Simon Bray12
  • Wolfgang Maier12
  • nekrut12
  • Mathieu Bourgey11
  • Paul Zierep11
  • Alexander Botzki10
  • Canadian Bioinformatics Workshops10
  • Daniel Blankenberg10
  • Instituto Gulbenkian de Ciência10
  • Khaled Jum'ah10
  • Martin Čech10
  • Paul Yorke10
  • Pavankumar Videm10
  • Wandrille Duchemin10
  • @posit-pbc9
  • Anika Erxleben9
  • Anup Kumar9
  • David Wishart9
  • Eija Korpelainen9
  • Fred Hutch Data Science Lab9
  • Jared Simpson9
  • John Chilton9
  • Lucille Delisle9
  • Praveen Kumar9
  • allegra.via Via9
  • rstudio::conf(2022)9
  • Allegra Via8
  • Anne Pajon8
  • Avans Hogeschool8
  • Boris Steipe8
  • Emma Leith8
  • Helen Brown8
  • Joachim Wolff8
  • Kaivan Kamali8
  • Malachi Griffith8
  • Maria Levchenko8
  • Matthias Fahrner8
  • Robert Andrews8
  • Samaha, Georgina (orcid: 0000-0003-0419-1476)8
  • Sara Morsy8
  • Sundeep Agarwal8
  • Timothy J. Griffin8
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• • Contributor
  • Helena Rasche134
  • Robert Andrews55
  • Bérénice Batut52
  • Saskia Hiltemann50
  • carpentries-incubator46
  • Björn Grüning43
  • Munazah Andrabi43
  • SIB Swiss Institute of Bioinformatics28
  • Simon Gladman25
  • Anthony Bretaudeau24
  • Bazante Sanders23
  • Erasmus+ Programme22
  • NBIS - National Bioinformatics Infrastructure Sweden20
  • Nate Coraor20
  • posit-conf-202320
  • Donny Vrins18
  • The Carpentries18
  • UC Davis Bioinformatics Core Training Page18
  • Teaching materials at the Harvard Chan Bioinformatics Core17
  • posit::conf(2024)17
  • Data Carpentry16
  • Mehmet Tekman16
  • Pratik Jagtap16
  • Wendi Bacon16
  • Yvan Le Bras16
  • Nicola Soranzo15
  • Wolfgang Maier15
  • Anne Fouilloux14
  • Pavankumar Videm14
  • bioinformatics.ca14
  • Anton Nekrutenko13
  • CRUK CI Bioinformatics Core13
  • Fotis E. Psomopoulos13
  • Marius van den Beek13
  • Timothy J. Griffin13
  • Maria Doyle12
  • Simon Bray12
  • John Chilton11
  • Melanie Föll11
  • Subina Mehta11
  • Canadian Bioinformatics Workshops10
  • Cristóbal Gallardo10
  • Instituto Gulbenkian de Ciência10
  • The Gulbenkian Training Programme in Bioinformatics10
  • @posit-pbc9
  • Avans Hogeschool9
  • Dave Clements9
  • Delphine Lariviere9
  • Erwan Corre9
  • Fred Hutch Data Science Lab9
  • Lucille Delisle9
  • rstudio::conf(2022)9
  • Anup Kumar8
  • Eija Korpelainen8
  • Elin Kronander8
  • Kaivan Kamali8
  • Martin Čech8
  • Matthias Fahrner8
  • Sabine Österle8
  • Stéphanie Robin8
  • Sundeep Agarwal8
  • Wolmar Nyberg Åkerström8
  • Alex Ostrovsky7
  • Alexandre Cormier7
  • Allyson Lister7
  • AstraZeneca7
  • Bioinformatics, Rockefeller University7
  • Daniel Blankenberg7
  • Florian Christoph Sigloch7
  • Laura Leroi7
  • Markus Englund7
  • Mattias Strömberg7
  • Niclas Jareborg7
  • Praveen Kumar7
  • Sergio Martínez Cuesta7
  • Stephan Nylinder7
  • Yvonne Kallberg7
  • Anika Erxleben6
  • Anna Syme6
  • Biocore@CRG6
  • Christopher Barnett6
  • Daniel Sobral6
  • Emma Leith6
  • Erik Hedman6
  • Gildas Le Corguillé6
  • Joachim Wolff6
  • JuliaAcademy6
  • Software Carpentry6
  • Beatriz Serrano-Solano5
  • Branka Franicevic 5
  • Hadley Wickham5
  • Hans-Rudolf Hotz5
  • Health Data Science Sandbox5
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• • Resource type
  • e-learning617
  • Recorded webinar241
  • slides138
  • Video116
  • Tutorial106
  • Training materials51
  • Course materials45
  • Slides45
  • Webinar37
  • Presentation31
  • Slidedeck31
  • lessons29
  • Documentation28
  • hands-on tutorial28
  • course materials25
  • video24
  • Scripts18
  • Exercise17
  • Handout17
  • PDF9
  • E-learning8
  • Series of videos6
  • Online material5
  • Talk5
  • Bioinformatics4
  • E-Learning4
  • FREE online course4
  • podcast4
  • Jupyter notebook3
  • Life Sciences Literature Database3
  • Mock data3
  • online course3
  • online modules3
  • tutorial3
  • youtube video3
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  • Book2
  • Coding2
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• • Related resource
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