Training materials
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carpentries-lab/metagenomics-R
Metagenomics R
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carpentries-lab/metagenomics-workshop
Genomics Metagenomics Sequencing Next generation sequencing
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telatin/microbiome-bioinformatics
Metagenomics Nextflow General Unix/Linux Data science
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carpentries-lab/metagenomics-analysis
Genome assembly Genomics Metagenomics Sequencing Next generation sequencing
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waldronlab/curatedMetagenomicDataAnalyses
Metagenomics
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metagenomics/denbi-nanopore-training
Genome assembly Genomics Metagenomics Long read sequencing
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ISUgenomics/bioinformatics-workbook
Workflows Data management Data visualisation Comparative genomics Epigenetics Genome annotation Genome assembly Metagenomics RNA-Seq Transcriptomics Variant pattern analysis Nextflow General Data visualization Unix/Linux ATAC-seq RNA-seq Variant analysis
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galaxyproject/training-material
Data management FAIR data ChIP-seq Comparative genomics Epigenetics Genome annotation Genome assembly Genomics Metagenomics Microbiology Sequencing RNA-Seq Single-cell sequencing Transcriptomics Variant pattern analysis Machine learning Statistics and probability Metabolomics Proteomics Galaxy Snakemake General Reproducibility Python R Unix/Linux Version control ATAC-seq Next generation sequencing RNA-seq Variant analysis Data science Statistics Long read sequencing
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hands-on tutorial
Hands-on for 'Taxonomic Profiling and Visualization of Metagenomic Data' tutorial
• beginnerMetagenomics metagenomics taxonomic profiling -
hands-on tutorial
Hands-on for 'Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition' tutorial
• beginnerMetagenomics metagenomics Nanopore data analysis Pathogens detection Phylogenetic tree Heatmap cyoa