Training materials
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e-learning
Clustering 3K PBMCs with Scanpy
• beginnerTranscriptomics 10x Single Cell -
e-learning
GO Enrichment Analysis
• beginnerTranscriptomics -
e-learning
2: RNA-seq counts to genes
• beginnerTranscriptomics QC limma-voom mouse -
e-learning
1: RNA-Seq reads to counts
• beginnerTranscriptomics QC collections mouse -
e-learning
Single-cell quality control with scater
• beginnerTranscriptomics Single Cell -
e-learning
Visualization of RNA-Seq results with heatmap2
• beginnerTranscriptomics -
e-learning
Downstream Single-cell RNA analysis with RaceID
• beginnerTranscriptomics Single Cell -
e-learning
Small Non-coding RNA Clustering using BlockClust
• beginnerTranscriptomics -
e-learning
Generating a single cell matrix using Alevin
• beginnerTranscriptomics 10x MIGHTS Single Cell paper-replication -
e-learning
Filter, plot and explore single-cell RNA-seq data with Scanpy
• beginnerTranscriptomics 10x MIGHTS Single Cell paper-replication