Materials - TeSS (Training eSupport System)

e-Learning

Register training material

Tools: NanoPlot

and Licence: Creative Commons Attribution 4.0 International

and Resource type: e-learning

7 e-learning materials found

e-learning

Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition

• beginner
Metagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis …
e-learning

Antibiotic resistance detection

• beginner
Metagenomics Microbial ecology Metagenomic sequencing Public health and epidemiology Microbiology Infectious disease Sequence analysis Antimicrobial resistance Microbiome amr …
e-learning

Large genome assembly and polishing

• beginner
Sequence assembly Assembly assembly nanopore plants polishing
e-learning

Chloroplast genome assembly

• beginner
Sequence assembly Assembly jbrowse1 nanopore plants
e-learning

Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)

• beginner
Sequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial resistance Assembly amr assembly microgalaxy …
e-learning

Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads

•• intermediate
Sequence assembly Assembly covid19
e-learning

Quality Control

• beginner
Sequence analysis