Training materials
Tools: SCANPY
and Related resources: Associated Training Datasets
and Licence: Creative Commons Attribution 4.0 International
-
e-learning
Single-cell ATAC-seq standard processing with SnapATAC2
•• intermediate10x Single Cell epigenetics single-cell -
e-learning
Converting NCBI Data to the AnnData Format
• beginnerSingle Cell data import data management -
e-learning
Converting between common single cell data formats
• beginnerSingle Cell data import data management -
e-learning
Inferring single cell trajectories with Scanpy
• beginner10x MIGHTS Single Cell paper-replication -
e-learning
Scanpy Parameter Iterator
• beginnerSingle Cell -
e-learning
Pre-processing of 10X Single-Cell ATAC-seq Datasets
• beginner10x Single Cell epigenetics -
e-learning
Removing the effects of the cell cycle
• beginner10x Single Cell -
e-learning
Combining single cell datasets after pre-processing
• beginnerTranscriptomics 10x MIGHTS Single Cell paper-replication -
e-learning
Analysis of plant scRNA-Seq Data with Scanpy
• beginnerTranscriptomics Single Cell paper-replication plants -
e-learning
Clustering 3K PBMCs with Scanpy
• beginnerTranscriptomics 10x Single Cell
- 1
- 2