Training materials
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bioinformaticsdotca/EPI_2023
ChIP-seq Epigenetics Sequencing Next generation sequencing
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haibol2016/ATACseqQCWorkshop
Epigenetics ATAC-seq
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liulab-dfci/bioinfo-combio
ChIP-seq Epigenetics Genomics Sequencing Single-cell sequencing Transcriptomics Variant pattern analysis General ATAC-seq Next generation sequencing Variant analysis
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ISUgenomics/bioinformatics-workbook
Workflows Data management Data visualisation Comparative genomics Epigenetics Genome annotation Genome assembly Metagenomics RNA-Seq Transcriptomics Variant pattern analysis Nextflow General Data visualization Unix/Linux ATAC-seq RNA-seq Variant analysis
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galaxyproject/training-material
Data management FAIR data ChIP-seq Comparative genomics Epigenetics Genome annotation Genome assembly Genomics Metagenomics Microbiology Sequencing RNA-Seq Single-cell sequencing Transcriptomics Variant pattern analysis Machine learning Statistics and probability Metabolomics Proteomics Galaxy Snakemake General Reproducibility Python R Unix/Linux Version control ATAC-seq Next generation sequencing RNA-seq Variant analysis Data science Statistics Long read sequencing
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e-learning
ATAC-Seq data analysis
• beginnerEpigenomics Epigenetics -
e-learning
Hi-C analysis of Drosophila melanogaster cells using HiCExplorer
• beginnerEpigenomics Epigenetics -
e-learning
Formation of the Super-Structures on the Inactive X
• beginnerEpigenomics ChIP-seq Epigenetics -
e-learning
DNA Methylation data analysis
• beginnerEpigenomics Epigenetics -
e-learning
Identification of the binding sites of the Estrogen receptor
• beginnerEpigenomics ChIP-seq Epigenetics work-in-progress