Training materials
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and Operations: Somatic variant calling
and Licence: Creative Commons Attribution Share Alike 4.0 International
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Operation
- Somatic variant calling
- Data handling6
- File handling6
- File processing6
- Processing6
- Report handling6
- Utility operation6
- Database retrieval4
- Query4
- Query and retrieval4
- Data extraction3
- Data retrieval3
- Data retrieval (metadata)3
- Metadata retrieval3
- Retrieval3
- Normalisation2
- Standardisation2
- Standardisation and normalisation2
- Alignment1
- Alignment construction1
- Alignment generation1
- Allele calling1
- Data visualisation1
- Database search1
- Design1
- Exome variant detection1
- Genome variant detection1
- Germ line variant calling1
- Molecular visualisation1
- Mutation detection1
- Ontology browsing1
- Ontology visualisation1
- Plotting1
- Quality control1
- Read pre-processing1
- Rendering1
- Search1
- Sequence read pre-processing1
- Validation1
- Variant calling1
- Variant mapping1
- Visualisation1
- de novo mutation detection1
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Content provider
- SIB Swiss Institute of Bioinformatics1
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Difficulty level
- Beginner1
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- Computer Software1
- workflow1
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