Training materials
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e-learning
Taxonomic Profiling and Visualization of Metagenomic Data
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Microbiome metagenomics microgalaxy taxonomic profiling -
e-learning
Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition
• beginnerMetagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis Pathogens detection Phylogenetic tree cyoa microgalaxy -
e-learning
Pathway analysis with the MINERVA Platform
•• intermediateTranscriptomics bulk cyoa rna-seq viz -
e-learning
Phylogenetics - Back to basics
•• intermediateEvolutionary biology Evolution evolution phylogenetics -
e-learning
Inferring single cell trajectories with Scanpy
• beginner10x MIGHTS Single Cell paper-replication -
e-learning
Checking expected species and contamination in bacterial isolate
• beginnerEcology Whole genome sequencing Genomics Microbiology Microbial ecology bacteria illumina microgalaxy -
e-learning
Clinical Metaproteomics 5: Data Interpretation
• beginnerMetagenomics Microbial ecology Microbiome label-TMT11 -
e-learning
Clinical Metaproteomics 3: Verification
• beginnerMetagenomics Microbial ecology Microbiome label-TMT11 -
e-learning
Clinical Metaproteomics 4: Quantitation
• beginnerMetagenomics Microbial ecology Microbiome label-TMT11 -
e-learning
Clinical Metaproteomics 2: Discovery
• beginnerMetagenomics Microbial ecology Microbiome label-TMT11