Training materials
Difficulty level: Intermediate
and Tools: Galaxy
and Related resources: Associated Training Datasets
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e-learning
Genome annotation with Helixer
•• intermediateGenome Annotation eukaryota helixer jbrowse1 -
e-learning
Single-cell ATAC-seq standard processing with SnapATAC2
•• intermediate10x Single Cell epigenetics single-cell -
e-learning
Pathway analysis with the MINERVA Platform
•• intermediateTranscriptomics bulk cyoa rna-seq viz -
e-learning
Phylogenetics - Back to basics
•• intermediateEvolutionary biology Evolution evolution phylogenetics -
e-learning
Ploting a Microbial Genome with Circos
•• intermediateVisualisation -
e-learning
Mass spectrometry: GC-MS data processing (with XCMS, RAMClustR, RIAssigner, and matchms)
•• intermediateMetabolomics -
e-learning
Supervised Learning with Hyperdimensional Computing
•• intermediateStatistics and probability Statistics and machine learning -
e-learning
Long non-coding RNAs (lncRNAs) annotation with FEELnc
•• intermediateGenome Annotation eukaryote -
e-learning
Genome Assembly Quality Control
•• intermediateSequence assembly Assembly assembly quality control -
e-learning
Refining Genome Annotations with Apollo (eukaryotes)
•• intermediateGenome Annotation apollo2 cyoa eukaryote gmod jbrowse1