Materials - TeSS (Training eSupport System)

Training materials

Register training material

Contributors: Wolfgang Maier

and Tools: SAMtools

and Related resources: Associated Training Datasets

7 materials found

e-learning

Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition

• beginner
Metagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis …
e-learning

Exome sequencing data analysis for diagnosing a genetic disease

• beginner
Genetic variation Variant Analysis
e-learning

Identification of somatic and germline variants from tumor and normal sample pairs

• beginner
Genetic variation Variant Analysis
e-learning

M. tuberculosis Variant Analysis

•• intermediate
Genetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote …
e-learning

Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads

•• intermediate
Sequence assembly Assembly covid19
e-learning

Reference-based RNA-Seq data analysis

• beginner
Transcriptomics QC bulk collections cyoa drosophila rna-seq
e-learning

Identifying tuberculosis transmission links: from SNPs to transmission clusters

•• intermediate
Evolutionary biology Genomics Microbiology Infectious disease DNA polymorphism Evolution microgalaxy one-health prokaryote