Training materials
Contributors: Pavankumar Videm
and Tools: Biopython
and Related resources: Associated Training Datasets
2 materials found
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Scientific topic
- Comparative transcriptomics2
- Transcriptome2
- Transcriptomics2
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Tool
- Biopython
- Galaxy20
- SCANPY8
- FastQC4
- DropletUtils3
- SAMtools3
- STAR3
- BEDTools2
- BWA2
- MACS2
- MultiQC2
- RSeQC2
- RStudio2
- Salmon2
- Targetfinder.org2
- miRDeep22
- pyGenomeTracks2
- Alevin1
- Bowtie 21
- Cutadapt1
- DESeq21
- DeepTools1
- FeatureCounts1
- GOseq1
- IsoformSwitchAnalyzeR1
- MuSiC suite: PoPMuSiC, HoTMuSiC, and SNPMuSiC1
- PfamScan1
- R1
- StringTie1
- Trim Galore1
- Unipept1
- annotatemyids1
- blockbuster1
- compute_sequence_length1
- epiScanpy1
- fastp1
- gffcompare1
- gffread1
- ggplot21
- pathview1
- rnaQUAST1
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Content provider
- GTN2
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Difficulty level
- Beginner2
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Target audience
- Students2
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Contributor
- Pavankumar Videm
- Helena Rasche5
- Saskia Hiltemann4
- Björn Grüning3
- Cristóbal Gallardo3
- Beatriz Serrano-Solano2
- Bérénice Batut2
- Nicola Soranzo2
- Anne Fouilloux1
- Anthony Bretaudeau1
- James Johnson1
- Lucille Delisle1
- Mehmet Tekman1
- Melanie Föll1
- Nate Coraor1
- Subina Mehta1
- Wendi Bacon1
- Yvan Le Bras1
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Resource type
- e-learning1
- slides1
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Related resource
- Associated Training Datasets
- Associated Workflows2
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