Training materials
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e-learning
Updating tool versions in a tutorial
• beginnerContributing to the Galaxy Training Material -
e-learning
Predicting EI+ mass spectra with QCxMS
• beginnerMetabolomics -
e-learning
Converting NCBI Data to the AnnData Format
• beginnerSingle Cell data import data management -
e-learning
Converting between common single cell data formats
• beginnerSingle Cell data import data management -
e-learning
Importing files from public atlases
• beginnerSingle Cell data import data management -
e-learning
Filter, plot and explore single-cell RNA-seq data with Scanpy (Python)
• beginner10x MIGHTS Python Single Cell jupyter-notebook paper-replication -
e-learning
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x MIGHTS Single Cell jupyter-notebook paper-replication -
e-learning
Scanpy Parameter Iterator
• beginnerSingle Cell -
slides
Trajectory analysis
• beginnerSingle Cell -
e-learning
Inferring single cell trajectories with Monocle3 (R)
• beginner10x MIGHTS R Single Cell jupyter-notebook paper-replication rmarkdown-notebook
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