Training materials
-
e-learning
Combining single cell datasets after pre-processing
• beginnerTranscriptomics 10x MIGHTS Single Cell paper-replication -
e-learning
Inferring single cell trajectories with Scanpy (Python)
• beginnerTranscriptomics 10x MIGHTS Python Single Cell jupyter-notebook paper-replication -
e-learning
Trio Analysis using Synthetic Datasets from RD-Connect GPAP
••• advancedGenetic variation Variant Analysis cyoa -
e-learning
Genomic Data Visualisation with JBrowse
•• intermediateVisualisation gmod jbrowse1 -
e-learning
Visualisation with Circos
•• intermediateVisualisation -
e-learning
Refining Genome Annotations with Apollo (prokaryotes)
•• intermediateGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation apollo2 gmod jbrowse1 microgalaxy prokaryote -
e-learning
Galaxy Admin Training
••• advancedTeaching and Hosting Galaxy training -
e-learning
Training Infrastructure as a Service
• beginnerTeaching and Hosting Galaxy training cyoa -
e-learning
Organizing a workshop
• beginnerTeaching and Hosting Galaxy training -
e-learning
Scripting Galaxy using the API and BioBlend
• beginnerSoftware engineering Development in Galaxy jupyter-notebook