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Keywords: covid19

and Licence: Creative Commons Attribution 4.0 International

and Contributors: Helena Rasche

10 materials found

e-learning

SARS-CoV-2 Viral Sample Alignment and Variant Visualization

• beginner
Sequence analysis covid19 gmod jbrowse1
e-learning

From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis

• beginner
Genetic variation Variant Analysis covid19 one-health virology
e-learning

Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data

•• intermediate
Genetic variation Variant Analysis covid19 one-health virology
e-learning

Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads

•• intermediate
Sequence assembly Assembly covid19
e-learning

Automating Galaxy workflows using the command line

• beginner
Using Galaxy and Managing your Data covid19 variant-analysis workflows
e-learning

SRA Aligned Read Format to Speed Up SARS-CoV-2 data Analysis

• beginner
Using Galaxy and Managing your Data covid19 ncbi
e-learning

Submitting sequence data to ENA

•• intermediate
Using Galaxy and Managing your Data covid19
e-learning

Virtual screening of the SARS-CoV-2 main protease with rxDock and pose scoring

•• intermediate
Computational chemistry covid19 one-health
slides

Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads

• beginner
Sequence assembly Assembly covid19
slides

Introduction to SRA Aligned Read Format and Cloud Metadata for SARS-CoV-2

• beginner
Using Galaxy and Managing your Data covid19 ncbi