Training materials
Contributors: Gildas Le Corguillé
and Tools: Galaxy
and Related resources: Associated Training Datasets
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e-learning
Analyses of metagenomics data - The global picture
• beginnerMetagenomics Microbial ecology Taxonomy Sequence analysis Metabarcoding Microbiome microgalaxy -
slides
Mass spectrometry: LC-MS preprocessing - advanced
• beginnerMetabolomics -
e-learning
Exome sequencing data analysis for diagnosing a genetic disease
• beginnerGenetic variation Variant Analysis -
e-learning
Calling variants in non-diploid systems
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote -
e-learning
Genome annotation with Maker
••• advancedGenome Annotation eukaryote gmod jbrowse1 maker -
e-learning
ATAC-Seq data analysis
• beginnerEpigenomics Epigenetics -
e-learning
Formation of the Super-Structures on the Inactive X
• beginnerEpigenomics ChIP-seq Epigenetics -
e-learning
DNA Methylation data analysis
• beginnerEpigenomics Epigenetics -
e-learning
Unicycler Assembly
• beginnerSequence assembly Genomics Microbiology Assembly microgalaxy prokaryote -
e-learning
De Bruijn Graph Assembly
• beginnerSequence assembly Assembly