Materials - TeSS (Training eSupport System)

Training materials

Register training material

Tools: SAMtools

and Target audience: Students

and Contributors: Cristóbal Gallardo

9 materials found

e-learning

Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition

• beginner
Metagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis …
e-learning

ERGA post-assembly QC

• beginner
Sequence assembly Assembly QC animals assembly genome plants
e-learning

M. tuberculosis Variant Analysis

•• intermediate
Genetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote …
e-learning

Formation of the Super-Structures on the Inactive X

• beginner
Epigenomics ChIP-seq Epigenetics
e-learning

Reference-based RNA-Seq data analysis

• beginner
Transcriptomics QC bulk collections cyoa drosophila rna-seq
slides

Introduction to ATAC-Seq data analysis

• beginner
Epigenomics Epigenetics
slides

ChIP-seq data analysis

• beginner
Epigenomics Epigenetics
slides

Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads

• beginner
Sequence assembly Assembly covid19
slides

Mapping

• beginner
Sequence analysis