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Training materials

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Contributors: Cristóbal Gallardo

and Scientific topics: Sequence assembly

and Tools: SAMtools

4 materials found

e-learning

Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition

• beginner
Metagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis …
e-learning

ERGA post-assembly QC

• beginner
Sequence assembly Assembly QC animals assembly genome plants
e-learning

M. tuberculosis Variant Analysis

•• intermediate
Genetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote …
slides

Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads

• beginner
Sequence assembly Assembly covid19