Training materials
Contributors: Cristóbal Gallardo
and Scientific topics: Environmental microbiology
and Tools: Clair3
1 material found
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Scientific topic
- Environmental microbiology
- Assembly1
- Biological sequences1
- Community analysis1
- Disease1
- Epidemiology1
- Metagenomics1
- Microbial ecology1
- Microbiome1
- Molecular community analysis1
- Pathology1
- Public health1
- Public health and epidemiology1
- Sequence analysis1
- Sequence assembly1
- Sequence databases1
- Shotgun metagenomics1
- Taxonomy1
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Tool
- Clair3
- Galaxy5
- taxonomy_krona_chart5
- kraken24
- FastQC3
- KrakenTools3
- fastp3
- MetaPhlAn2
- MultiQC2
- ABRicate1
- BCFtools1
- BEDTools1
- BamTools1
- Bandage1
- Bracken1
- Clustal 2 (Clustal W, Clustal X)1
- Cutadapt1
- FastTree1
- Flye1
- GraPhlAn1
- HUMAnN21
- MLST1
- Medaka1
- Minimap21
- NanoPlot1
- Newick Utilities1
- SAMtools1
- SortMeRNA1
- export2graphlan1
- ggplot21
- humann1
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