Training materials
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e-learning
Genome annotation with Helixer
•• intermediateGenome Annotation eukaryota helixer jbrowse1 -
e-learning
Genome Annotation
• beginnerGenome Annotation prokaryote work-in-progress -
e-learning
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial resistance Genome Annotation amr gmod … -
e-learning
Bacterial Genome Annotation
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Whole genome sequencing Functional genomics Mobile genetic elements Genome Annotation bacteria gmod … -
slides
Introduction to Genome Annotation
•• intermediateGenome Annotation -
e-learning
Long non-coding RNAs (lncRNAs) annotation with FEELnc
•• intermediateGenome Annotation eukaryote -
e-learning
Refining Genome Annotations with Apollo (eukaryotes)
•• intermediateGenome Annotation apollo2 cyoa eukaryote gmod jbrowse1 -
e-learning
Essential genes detection with Transposon insertion sequencing
• beginnerGenomics Microbiology Sequence analysis Mobile genetic elements Genome Annotation bacteria essential genes microgalaxy tnseq -
e-learning
Genome annotation with Maker
••• advancedGenome Annotation eukaryote gmod jbrowse1 maker -
e-learning
Functional annotation of protein sequences
• beginnerGenome Annotation eukaryote
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