Training materials
Contributors: Anthony Bretaudeau
and Tools: Galaxy
and Related resources: Associated Training Datasets
44 materials found
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e-learning
Genome annotation with Helixer
•• intermediateGenome Annotation eukaryota helixer jbrowse1 -
e-learning
SARS-CoV-2 Viral Sample Alignment and Variant Visualization
• beginnerSequence analysis covid19 gmod jbrowse1 -
e-learning
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial resistance Genome Annotation amr gmod … -
e-learning
Bacterial Genome Annotation
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Whole genome sequencing Functional genomics Mobile genetic elements Genome Annotation bacteria gmod … -
slides
JBrowse
• beginnerVisualisation -
e-learning
Long non-coding RNAs (lncRNAs) annotation with FEELnc
•• intermediateGenome Annotation eukaryote -
e-learning
Comparative gene analysis in unannotated genomes
• beginnerGenomics Gene and protein families Sequence analysis Phylogeny Genome Annotation annotation cookbook eukaryote evolution microgalaxy … -
e-learning
Genome Assembly Quality Control
•• intermediateSequence assembly Assembly assembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
e-learning
Refining Genome Annotations with Apollo (eukaryotes)
•• intermediateGenome Annotation apollo2 cyoa eukaryote gmod jbrowse1