Training materials
Target audience: Students
and Licence: Creative Commons Attribution 4.0 International
and Contributors: Wendi Bacon
48 materials found
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e-learning
GO Enrichment Analysis on Single-Cell RNA-Seq Data
• beginnerGO enrichment Single Cell single cell -
e-learning
Converting NCBI Data to the AnnData Format
• beginnerSingle Cell data import data management -
e-learning
Importing files from public atlases
• beginnerSingle Cell data import data management -
e-learning
Filter, plot, and explore single cell RNA-seq data with Seurat
• beginner10x MIGHTS Single Cell paper-replication -
e-learning
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x MIGHTS Single Cell jupyter-notebook paper-replication -
e-learning
Inferring single cell trajectories with Scanpy
• beginner10x MIGHTS Single Cell paper-replication -
e-learning
Filter, plot and explore single-cell RNA-seq data with Scanpy (Python)
• beginner10x MIGHTS Python Single Cell jupyter-notebook paper-replication -
e-learning
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x MIGHTS R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
e-learning
Scanpy Parameter Iterator
• beginnerSingle Cell -
slides
Automated Cell Annotation
• beginnerSingle Cell