Training materials
Target audience: Students
and Scientific topics: MS-based targeted proteomics
and Contributors: Nicola Soranzo
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slides
Introduction to proteomics, protein identification, quantification and statistical modelling
• beginnerProteomics -
e-learning
Label-free versus Labelled - How to Choose Your Quantitation Method
• beginnerProteomics DDA -
e-learning
Secretome Prediction
•• intermediateProteomics human work-in-progress -
e-learning
Proteogenomics 1: Database Creation
•• intermediateProteomics proteogenomics -
e-learning
Proteogenomics 2: Database Search
•• intermediateProteomics proteogenomics -
e-learning
Peptide and Protein Quantification via Stable Isotope Labelling (SIL)
••• advancedProteomics DDA SILAC -
e-learning
Peptide and Protein ID using SearchGUI and PeptideShaker
• beginnerProteomics DDA HeLa -
e-learning
Proteogenomics 3: Novel peptide analysis
•• intermediateProteomics proteogenomics -
e-learning
Detection and quantitation of N-termini (degradomics) via N-TAILS
•• intermediateProteomics -
e-learning
Peptide and Protein ID using OpenMS tools
••• advancedProteomics DDA HeLa
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