Training materials
-
e-learning
2: RNA-seq counts to genes
• beginnerTranscriptomics QC limma-voom mouse -
e-learning
1: RNA-Seq reads to counts
• beginnerTranscriptomics QC collections mouse -
e-learning
Single-cell quality control with scater
• beginnerTranscriptomics Single Cell -
e-learning
Visualization of RNA-Seq results with heatmap2
• beginnerTranscriptomics -
e-learning
Downstream Single-cell RNA analysis with RaceID
• beginnerTranscriptomics Single Cell -
e-learning
Small Non-coding RNA Clustering using BlockClust
• beginnerTranscriptomics -
e-learning
Generating a single cell matrix using Alevin
• beginnerTranscriptomics 10x MIGHTS Single Cell paper-replication -
e-learning
Filter, plot and explore single-cell RNA-seq data with Scanpy
• beginnerTranscriptomics 10x MIGHTS Single Cell paper-replication -
e-learning
Bulk RNA Deconvolution with MuSiC
• beginnerTranscriptomics Single Cell transcriptomics -
e-learning
Reference-based RNA-Seq data analysis
• beginnerTranscriptomics QC bulk collections cyoa drosophila rna-seq