Training materials
Scientific topics: Comparative transcriptomics
and Contributors: Björn Grüning
and Related resources: Associated Workflows
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e-learning
Genome-wide alternative splicing analysis
••• advancedTranscriptomics alternative splicing isoform switching -
e-learning
Pathway analysis with the MINERVA Platform
•• intermediateTranscriptomics bulk cyoa rna-seq viz -
slides
Identification of non-canonical ORFs and their potential biological function
• beginnerTranscriptomics -
e-learning
Combining single cell datasets after pre-processing
• beginnerTranscriptomics 10x MIGHTS Single Cell paper-replication -
e-learning
RNA-RNA interactome data analysis
• beginnerTranscriptomics -
e-learning
Whole transcriptome analysis of Arabidopsis thaliana
• beginnerTranscriptomics miRNA plants stress tolerance -
e-learning
De novo transcriptome reconstruction with RNA-Seq
• beginnerTranscriptomics -
e-learning
Visualization of RNA-Seq results with Volcano Plot
• beginnerTranscriptomics -
e-learning
De novo transcriptome assembly, annotation, and differential expression analysis
• beginnerTranscriptomics -
e-learning
Pre-processing of 10X Single-Cell RNA Datasets
• beginnerTranscriptomics 10x Single Cell