Training materials
Content provider: SIB Swiss Institute of Bioinformatics
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and Operations: Somatic variant calling
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Operation
- Somatic variant calling
- Data handling9
- File handling9
- File processing9
- Processing9
- Report handling9
- Utility operation9
- Data extraction6
- Data retrieval6
- Data retrieval (metadata)6
- Metadata retrieval6
- Retrieval6
- Database retrieval5
- Query5
- Query and retrieval5
- Database search4
- Search4
- Normalisation3
- Standardisation3
- Standardisation and normalisation3
- Data visualisation2
- Design2
- Molecular visualisation2
- Ontology browsing2
- Ontology visualisation2
- Plotting2
- Rendering2
- Visualisation2
- Alignment1
- Alignment construction1
- Alignment generation1
- Allele calling1
- Data formatting1
- Data reformatting1
- Editing1
- Exome variant detection1
- File format conversion1
- File formatting1
- File reformatting1
- Format conversion1
- Genome variant detection1
- Germ line variant calling1
- Mutation detection1
- Quality control1
- Read pre-processing1
- Sequence read pre-processing1
- Validation1
- Variant calling1
- Variant mapping1
- de novo mutation detection1
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Content provider
- SIB Swiss Institute of Bioinformatics
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Difficulty level
- Beginner1
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- Computer Software1
- workflow1
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