Training materials
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e-learning
Virtual Environments For Software Development
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
e-learning
Conda Environments For Software Development
•• intermediateSoftware engineering Foundations of Data Science conda jupyter-notebook -
e-learning
Python - Type annotations
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
e-learning
Python - Testing
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
e-learning
Long non-coding RNAs (lncRNAs) annotation with FEELnc
•• intermediateGenome Annotation eukaryote -
e-learning
Genome Assembly Quality Control
•• intermediateSequence assembly Assembly assembly quality control -
e-learning
Refining Genome Annotations with Apollo (eukaryotes)
•• intermediateGenome Annotation apollo2 cyoa eukaryote gmod jbrowse1 -
e-learning
Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data
•• intermediateGenetic variation Variant Analysis covid19 one-health virology -
e-learning
M. tuberculosis Variant Analysis
•• intermediateGenetic variation Genomics Microbiology Sequence assembly Public health and epidemiology Infectious disease Variant Analysis microgalaxy one-health prokaryote tuberculosis -
e-learning
Genomic Data Visualisation with JBrowse
•• intermediateVisualisation gmod jbrowse1