Training materials
Keywords: Galaxy, Building, pathogen surveillance system, Automating, automation, workflows, command line
and Node: Switzerland
and Content provider: BY-COVID
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- Galaxy, Building, pathogen surveillance system, Automating, automation, workflows, command line
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- Galaxy, Build, pathogen surveillance system, automated, automation, SARS-CoV-2, genome surveillance, system1
- Galaxy, Building, pathogen surveillance system, Removal,human reads, SARS-CoV-2, sequencing data1
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- Galaxy, FAIR data, data provenance, RO-Crate, Workflow Run, RO-Crate Introduction1
- Galaxy, Mutation calling, viral genome reconstruction, lineage assignment, clade assignment, SARS-CoV-2 sequencing data1
- Galaxy, NGS1
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- Galaxy, Quality control, QC1
- Galaxy, Removal, human reads, SARS-CoV-2 sequencing data1
- Galaxy, Scripting, coding, Galaxy, API, BioBlend1
- Galaxy, Sequencing data analysis, spectrum, viral genomes1
- Galaxy, Tuberculosis Sequence Analysis, Concepts, drug-resistance, prediction, mutation-based, clustering1
- Galaxy, Tuberculosis Sequence Analysis, Identifying, tuberculosis transmission, links, SNPs, transmission clusters1
- Galaxy, Tuberculosis Sequence Analysis, Implementation, NGS, TB- WHO, documents, considerations1
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- Galaxy, Viral Pathogen Analysis, Pox virus, genome analysis, tiled-amplicon, sequencing data1
- Galaxy, build, pathogen surveillance system, Mutation calling, viral genome, reconstruction, lineage/clade assignment, SARS-CoV-2, sequencing data1
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