Training materials
Authors: Anthony Bretaudeau
and Contributors: Saskia Hiltemann
and Related resources: Associated Workflows
13 materials found
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e-learning
Genome annotation with Helixer
•• intermediateGenome Annotation eukaryota helixer jbrowse1 -
e-learning
Genome Assembly Quality Control
•• intermediateSequence assembly Assembly assembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
e-learning
Functional annotation of protein sequences
• beginnerGenome Annotation eukaryote -
e-learning
Genome annotation with Maker
••• advancedGenome Annotation eukaryote gmod jbrowse1 maker -
e-learning
Refining Genome Annotations with Apollo (prokaryotes)
•• intermediateGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation apollo2 gmod jbrowse1 microgalaxy prokaryote -
e-learning
Masking repeats with RepeatMasker
• beginnerGenome Annotation eukaryote -
e-learning
Genome annotation with Funannotate
•• intermediateGenome Annotation eukaryote gmod jbrowse1 -
e-learning
Genome assembly using PacBio data
•• intermediateSequence assembly Assembly assembly pacbio -
e-learning
De novo transcriptome assembly, annotation, and differential expression analysis
• beginnerTranscriptomics
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