Training materials
Authors: Wendi Bacon
and Contributors: Helena Rasche
and Related resources: Associated Training Datasets
11 materials found
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e-learning
Converting between common single cell data formats
• beginnerSingle Cell data import data management -
e-learning
Filter, plot and explore single-cell RNA-seq data with Scanpy (Python)
• beginner10x MIGHTS Python Single Cell jupyter-notebook paper-replication -
e-learning
Inferring single cell trajectories with Scanpy
• beginner10x MIGHTS Single Cell paper-replication -
e-learning
Comparing inferred cell compositions using MuSiC deconvolution
• beginnerSingle Cell transcriptomics -
e-learning
Bulk matrix to ESet | Creating the bulk RNA-seq dataset for deconvolution
• beginnerSingle Cell data management transcriptomics -
e-learning
Combining single cell datasets after pre-processing
• beginnerTranscriptomics 10x MIGHTS Single Cell paper-replication -
e-learning
Inferring single cell trajectories with Scanpy (Python)
• beginnerTranscriptomics 10x MIGHTS Python Single Cell jupyter-notebook paper-replication -
e-learning
Pre-processing of 10X Single-Cell RNA Datasets
• beginnerTranscriptomics 10x Single Cell -
e-learning
Generating a single cell matrix using Alevin
• beginnerTranscriptomics 10x MIGHTS Single Cell paper-replication -
e-learning
Bulk RNA Deconvolution with MuSiC
• beginnerTranscriptomics Single Cell transcriptomics
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