Belgium
Pan genomics tutorial using Minima2 and seq-seq-pan
In these tutorials I guide you through code for a Minimap2 genome alignment and a seq-seq-pan pan-genome alignment with visualizations in R. The tutorial uses an example of two haplotypes of the optix locus in Heliconius butterflies.
Licence: Creative Commons Attribution 4.0 International
Contact: [email protected]
Keywords: pan genomics, genome alignment, Minimap2 alignment, seq-seq-pan, R visualization genome alignment
Status: Active
Prerequisites:
Basic understanding of Linux and R
Learning objectives:
Aligning two genomes and visualizing the results ni R
Date created: 2023-04-12
External resources:
Activity log
