e-learning
Metabarcoding/eDNA through Obitools
Abstract
Based on this OBITools official tutorial, you will learn here how to analyze DNA metabarcoding data produced on Illumina sequencers using:
About This Material
This is a Hands-on Tutorial from the GTN which is usable either for individual self-study, or as a teaching material in a classroom.
Questions this will address
- how to analyze DNA metabarcoding / eDNA data produced on Illumina sequencers using the OBITools?
Learning Objectives
- Deal with paired-end data to create consensus sequences
- Clean, filter and anlayse data to obtain strong results
Licence: Creative Commons Attribution 4.0 International
Keywords: Community composition EBV class, EBV dataset, EBV workflow, Ecology, Genetic composition EBV class, Metabarcoding, eDNA
Target audience: Students
Resource type: e-learning
Version: 11
Status: Active
Prerequisites:
Introduction to Galaxy Analyses
Learning objectives:
- Deal with paired-end data to create consensus sequences
- Clean, filter and anlayse data to obtain strong results
Date modified: 2024-06-27
Date published: 2022-02-28
Contributors: Coline Royaux, Eric Coissac, Frédéric Boyer, Olivier Norvez, Yvan Le Bras
Scientific topics: Ecology
Activity log
