e-learning
Mass spectrometry: LC-MS preprocessing with XCMS
Abstract
Metabolomics is a -omic science known for being one of the most closely related to phenotypes.
About This Material
This is a Hands-on Tutorial from the GTN which is usable either for individual self-study, or as a teaching material in a classroom.
Questions this will address
- What are the main steps of untargeted LC-MS data preprocessing for metabolomic analyses?
- How to conduct metabolomic data preprocessing using Galaxy?
Learning Objectives
- To comprehend the diversity of steps necessary to perform untargeted LC-MS metabolomic preprocessing.
- To get familiar with the way to use XCMS-based Galaxy modules dedicated to LC-MS data preprocessing.
- To evaluate the potential of a workflow approach when dealing with LC-MS preprocessing.
Licence: Creative Commons Attribution 4.0 International
Keywords: Metabolomics
Target audience: Students
Resource type: e-learning
Version: 14
Status: Active
Prerequisites:
Introduction to Galaxy Analyses
Learning objectives:
- To comprehend the diversity of steps necessary to perform untargeted LC-MS metabolomic preprocessing.
- To get familiar with the way to use XCMS-based Galaxy modules dedicated to LC-MS data preprocessing.
- To evaluate the potential of a workflow approach when dealing with LC-MS preprocessing.
Date modified: 2024-10-15
Date published: 2020-02-04
Contributors: Gildas Le Corguillé, Jean-François Martin, Mélanie Petera, Workflow4Metabolomics core team
Scientific topics: Metabolomics
External resources:
Activity log
