e-learning

Infinium Human Methylation BeadChip

Abstract

This tutorial is based on Hugo W, Shi H, Sun L, Piva M et al.: Non-genomic and Immune Evolution of Melanoma Acquiring MAPKi Resistance.

About This Material

This is a Hands-on Tutorial from the GTN which is usable either for individual self-study, or as a teaching material in a classroom.

Questions this will address

  • Which DNA regions and positions are diffrentialy methylated in pre MAPKi treatment and post MAPKi resistance Melanomas GSE65183?
  • How to analyse and visualise Infinium Human Methylation BeadChip's?

Learning Objectives

  • Learn how to perform reproducible Infinium Human Methylation BeadChip analysis
  • Visualise differentially methylated positions using UCSC browser

Licence: Creative Commons Attribution 4.0 International

Keywords: Epigenetics

Target audience: Students

Resource type: e-learning

Version: 21

Status: Active

Prerequisites:

  • Introduction to Galaxy Analyses
  • Mapping
  • Quality Control

Learning objectives:

  • Learn how to perform reproducible Infinium Human Methylation BeadChip analysis
  • Visualise differentially methylated positions using UCSC browser

Date modified: 2024-10-15

Date published: 2018-08-27

Authors: Katarzyna Kamieniecka, Khaled Jum'ah, Krzysztof Poterlowicz

Contributors: Katarzyna Murat, Krzysztof Poterlowicz

Scientific topics: Epigenomics


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