Events - TeSS (Training eSupport System)

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- European Bioinformatics Institute (EBI)14
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- DNA & RNA (dna-rna)9
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- • New developments in technology 1
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- NGS data analysis
- Bioinformatics1099
- Genome annotation302
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- Data visualisation185
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- Bottom-up proteomics152
- Discovery proteomics152
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- MS-based untargeted proteomics152
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- Peptide identification152
- Protein and peptide identification152
- Proteomics152
- Quantitative proteomics152
- Targeted proteomics152
- Top-down proteomics152
- Data management125
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- Pattern recognition113
- Aerobiology98
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- Comparative transcriptomics90
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- Biomathematics47
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- RNA-Seq analysis41
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- High-throughput sequencing36
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- DNA-Seq35
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- Operation
- Allele calling2
- Consensus-based sequence alignment2
- Constrained sequence alignment2
- Data visualisation2
- Exome variant detection2
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- Gene expression data analysis2
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- BWA2
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- Workshops and courses32
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- European Bioinformatics Institute, Hinxton6
- Craik-Marshall Building4
- Via Nizza, 522
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- Campus di Fisciano, Università degli Studi di Salerno, Via Giovanni Paolo II, n. 1321
- Gaustadalléen 23, 23, Gaustadalléen1
- KU Leuven - Promotion & Jubileumzaal, Naamsestraat 22, 22, Naamsestraat1
- LANGEBIO, Cinvestav, Libramiento Norte Carretera Leon Km 9.61
- Leuven - Campus Gasthuisberg, Herestraat 491
- Online1
- PC-COLLEGE Berlin, 78, Stresemannstraße1
- Station Biologique De Roscoff1
- Station Biologique De Roscoff, Place Georges Teissier1
- University of Costa Rica (UCR), Ciudad universitaria Rodrigo Facio Brenes1
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- United Kingdom11
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- European Bioinformatics Institute (EBI)14
- University of Cambridge4
- ecSeq Bioinformatics GmbH3
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- <a href="http://biont-training.eu/">BioNT</a> (BIO Network for Training) 1
- ABiMS (http://abims.sb-roscoff.fr/), AVIESAN (http://www.aviesan.fr/en), BiGEst (http://bigest.unistra.fr/), IFB (https://www.france-bioinformatique.fr/), IFB Core (https://www.france-bioinformatique.fr/), MIGALE (https://migale.inrae.fr)1
- Anna Marabotti (University of Salerno and ELIXIR-IIB Training Team, Italy), Roberto Tagliaferri (University of Salerno, Italy), Alessandro Weisz (University of Salerno, Italy), Loredana Le Pera (ELIXIR-IIB Training Team and IIT, Italy), Allegra Via (ELIXIR-IIB Training Coordinator, CNR-IBPM, Italy) 1
- Australian BioCommons1
- Aviesan ITMO GGB, Inserm, IFB1
- B&Gu, University of Turin, EuroClone 1
- NORBIS, the Norwegian national research school in bioinformatics, biostatistics and systems biology1
- Raffaele Calogero, Marco Beccuti, Loredana Le Pera, Allegra Via 1
- University of Leicester1
- VIB1
- ecseq Bioinformatics GmbH1
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- Aviesan ITMO GGB2
- IFB2
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- 101100604 - DIGITAL-2022-TRAINING-021
- Analis1
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- Co-funded by the European Commission1
- ELIXIR Belgium1
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- NORBIS1
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- Target audience
- bioinformaticians5
- Anyone who is using sequencing as part of their work and/or research.4
- Biologists4
- Biologists, Genomicists, Computer Scientists4
- Molecular Biologists4
- Pathologists4
- PhD students4
- post-docs3
- Cette formation est destinée aux biologistes (ingénieurs, doctorants, chercheurs, enseignants-chercheurs, praticiens…) confrontés à l’analyse de données NGS, et qui ne disposent pas des compétences bioinformatiques suffisantes.2
- Early Career Researchers (ECRs)1
- Job seeker1
- Life Science Researchers1
- PhD Students1
- PhD students and young researchers in the life science and computational biology field who are planning to use RNA-seq data and are looking for the best practices to analyze these types of data1
- Post Docs1
- Researchers1
- Small and Medium-sized Enterprises (SMEs)1
- The course is aimed at early-stage researchers working in the field of ecological genomics who want to make bioinformatics a significant part of their research. The course will also support the research of the Moore Foundation symbiosis community, in particular those working on the Aquatic Symbiosis Genomes project. Participants will require a basic knowledge of the Unix command line and the Ubuntu 18 operating system. We recommend taking these tutorials: Basic introduction to the Unix environment: www.ee.surrey.ac.uk/Teaching/Unix Introduction and exercises for Linux: https://training.linuxfoundation.org/free-linux-training Experience with both R and Python will also be essential for the computational sessions. Participants without basic knowledge of these resources will struggle to learn the practical skills developed during the course.1
- This course is aimed at PhD students and post-doctoral researchers who are applying or planning to apply high throughput sequencing technologies in cancer research and wish to familiarise themselves with bioinformatics tools and data analysis methodologies specific to cancer data. Familiarity with the technology and biological use cases of high throughput sequencing (HTS) is required, as is some experience with R/Bioconductor (basic understanding of the R syntax and ability to manipulate R objects) and the Unix/Linux operating system.1
- This course is aimed at PhD students and post-doctoral researchers who are using high-throughput sequencing technologies and bioinformatics methods in their research. The content is most applicable for those working with eukaryotic genomes, human genetics and in rare disease research. Participants will require a basic knowledge of the Unix command line, the Ubuntu 16 operating system and the R statistical packages. We recommend these free tutorials: Basic introduction to the Unix environment: www.ee.surrey.ac.uk/Teaching/Unix Introduction and exercises for Linux: https://training.linuxfoundation.org/free-linux-training Basic R concept tutorials: www.r-tutor.com/r-introduction Please note: participants without basic knowledge of these resources will have difficulty in completing the practical sessions.1
- This course is aimed at wet-lab researchers at any career stage within Latin America undertaking pathogen population genetics and surveillance, interested in applying next generation sequencing to virus identification. Those working in plant protection organizations and/or academia are welcome to apply, and priority will be given to those who have not yet attended a CABANA workshop. Please note this course will be taught in English, however the trainers are fluent in Spanish, and can offer language support where feasible.  A number of travel fellowships are available for this course - early-stage researchers and researchers from underrepresented groups are especially encouraged to apply for CABANA travel fellowships. You can apply for travel fellowships via the course application form. Priority will be given to those who have not previously been awarded a CABANA fellowship. Knowledge in R and NGS technologies is required. Therefore, these free resources should be studied beforehand:  Basic R concept tutorials: www.r-tutor.com/r-introduction  https://r4ds.had.co.nz/tidy-data.html Learning outcomes1
- This course is suitable for postgraduate students (MSc-level and above), postdoctoral-level researchers, newly established principal investigators and other research scientists within Latin America, who wish to use omics resources/analysis in their own research. We welcome applications from universities, research centres, hospitals, public health, and private laboratories. Scientists from underrepresented ethnic and gender groups are especially encouraged to apply for this workshop, for example women and those with Black and/or Indigenous heritage. Please note this course will be taught in English, however the trainers are fluent in either Portuguese or Spanish and can offer language support where feasible. Attendance priority will be given to those who have not attended a CABANA event yet. Prerequisites Working knowledge of genetics and/or molecular biology would be advantageous. You will also require access to a computer for the duration of the workshop. You do not need to know how to use UNIX / Linux operating systems and the command line, as the course covers the basics.  1
- This course is suitable for postgraduate wet-lab researchers at any career stage within Latin America who are working with and/or generating their own transcriptomic datasets.   Participants will require a basic knowledge of the Unix command line and the R statistical package. We recommend these free tutorials: Basic introduction to the Unix environment: www.ee.surrey.ac.uk/Teaching/Unix Introduction and exercises for Bio-Linux 7: http://nebc.nerc.ac.uk/support/training/course-notes/past-notes/intro-bl7 Basic R concept tutorials: www.r-tutor.com/r-introduction   Participants without basic knowledge of these resources will have difficulty in completing the practical sessions. We strongly recommend that you make every effort to access these materials and other training available online or within your host institute to best prepare you for the course.   A number of travel fellowships are available for this course - early-stage researchers and researchers from underrepresented groups are especially encouraged to apply for CABANA travel fellowships. You can apply for travel fellowships via the course application form.1
- biologists1
- postdoc1
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- Eligibility
- First come first served8
- Registration of interest4
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- Node
- EMBL-EBI14
- United Kingdom4
- Italy3
- France2
- Belgium1
- Czech Republic1
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and Scientific topics: NGS data analysis

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