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Scientific topic
- DNA variation4
- Genetic variation4
- Genomic variation4
- Mutation4
- Polymorphism4
- Somatic mutations4
- Bioinformatics3
- Exomes3
- Genome annotation3
- Genomes3
- Genomics3
- Personal genomics3
- Synthetic genomics3
- Viral genomics3
- Whole genomes3
- Chromosome walking2
- Clone verification2
- DNA-Seq2
- DNase-Seq2
- De novo genome sequencing2
- Genome sequencing2
- High throughput sequencing2
- High-throughput sequencing2
- NGS2
- NGS data analysis2
- Next gen sequencing2
- Next generation sequencing2
- Panels2
- Primer walking2
- Sanger sequencing2
- Sequencing2
- Targeted next-generation sequencing panels2
- WGS2
- Whole genome resequencing2
- Whole genome sequencing2
- Biomarkers1
- Biotherapeutics1
- Cancer1
- Cancer biology1
- ChIP-exo1
- ChIP-seq1
- ChIP-sequencing1
- Chip Seq1
- Chip sequencing1
- Chip-sequencing1
- Diagnostic markers1
- MicroRNA sequencing1
- Neoplasm1
- Neoplasms1
- Oncology1
- Pipelines1
- RNA sequencing1
- RNA-Seq1
- RNA-Seq analysis1
- Small RNA sequencing1
- Small RNA-Seq1
- Small-Seq1
- Software integration1
- Tool integration1
- Tool interoperability1
- Transcriptome profiling1
- WTSS1
- Whole transcriptome shotgun sequencing1
- Workflows1
- miRNA-seq1
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Operation
- Germ line variant calling
- Data handling42
- File handling42
- File processing42
- Processing42
- Report handling42
- Utility operation42
- Data deposition22
- Data submission22
- Database deposition22
- Database submission22
- Deposition16
- Submission16
- Analysis9
- Allele calling7
- Exome variant detection7
- Genome variant detection7
- Mutation detection7
- Somatic variant calling7
- Variant calling7
- Variant mapping7
- de novo mutation detection7
- Data brokering6
- Data deposition brokering6
- Data visualisation6
- Molecular visualisation6
- Plotting6
- Rendering6
- Visualisation6
- Data formatting3
- Data reformatting3
- File format conversion3
- File formatting3
- File reformatting3
- Format conversion3
- Functional genome annotation3
- Genome annotation3
- Metagenome annotation3
- Structural genome annotation3
- Consensus-based sequence alignment2
- Constrained sequence alignment2
- Data extraction2
- Data filtering2
- Data management planning2
- Data retrieval2
- Data retrieval (metadata)2
- Docking simulation2
- Expression analysis2
- Expression data analysis2
- File format validation2
- Format validation2
- Gene expression analysis2
- Gene expression data analysis2
- Gene expression regulation analysis2
- Genetic variation analysis2
- Genetic variation annotation2
- Macromolecular docking2
- Metadata retrieval2
- Metagenomic inference2
- Microarray data analysis2
- Molecular docking2
- Molecular surface analysis2
- Multiple sequence alignment (constrained)2
- Oligonucleotide alignment2
- Oligonucleotide alignment construction2
- Oligonucleotide alignment generation2
- Oligonucleotide mapping2
- Peak calling2
- Peak-pair calling2
- Protein binding peak detection2
- Protein expression analysis2
- Read alignment2
- Read mapping2
- Read pre-processing2
- Retrieval2
- Sequence alignment2
- Sequence alignment (constrained)2
- Sequence alignment construction2
- Sequence alignment generation2
- Sequence filtering2
- Sequence read pre-processing2
- Sequence variation analysis2
- Short oligonucleotide alignment2
- Short read alignment2
- Short read mapping2
- Short sequence read mapping2
- Structure database search2
- Transcript variant analysis2
- Variant analysis2
- rRNA filtering2
- Alternative splicing analysis1
- Alternative splicing detection1
- Alternative splicing prediction1
- Annotation1
- Biological pathway analysis1
- Biological pathway modelling1
- Biological pathway prediction1
- Breakend assembly1
- Cartography1
- Classification1
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Event type
- Workshops and courses7
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Organizer
- Australian BioCommons5
- ABiMS (http://abims.sb-roscoff.fr/), AVIESAN (http://www.aviesan.fr/en), BiGEst (http://bigest.unistra.fr/), IFB (https://www.france-bioinformatique.fr/), IFB Core (https://www.france-bioinformatique.fr/), MIGALE (https://migale.inrae.fr)1
- Pedro Fernandes1
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Target audience
- Biologists3
- bioinformaticians3
- Biologists and bioinformaticians who are dealing with high-throughput gene expression data or other high-throughput data and would like to learn state-of-the-art methods for mining and analysing such data.1
- Cette formation est destinée aux biologistes (ingénieurs, doctorants, chercheurs, enseignants-chercheurs, praticiens…) confrontés à l’analyse de données NGS, et qui ne disposent pas des compétences bioinformatiques suffisantes.1
- oncologists1
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