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Content provider
- European Bioinformatics Institute (EBI)7
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Keyword
- BioImage Archive4
- Bioimage analysis4
- Electron microscopy4
- Light microscopy4
- Machine learning models4
- Scientific computing4
- BioStudies Database2
- Electron Microscopy Public Image Archive - EMPIAR2
- Bioimage analysis resource1
- Ensembl Plants1
- European Nucleotide Archive1
- European Variation Archive1
- Expression Atlas1
- Germinate1
- Gramene1
- MGnify1
- MetaboLights: Metabolomics repository and reference database1
- PRIDE: The Proteomics Identifications Database1
- UniProt: The Universal Protein Resource1
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Scientific topic
- Bioinformatics50
- Genome annotation29
- Exomes26
- Genomes26
- Genomics26
- Personal genomics26
- Synthetic genomics26
- Viral genomics26
- Whole genomes26
- Protein bioinformatics24
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- Protein informatics24
- Proteins24
- Biomathematics23
- Computational biology23
- Mathematical biology23
- Theoretical biology23
- Protein structure20
- Protein function analysis19
- Protein function prediction19
- Molecular diagnostics18
- Personalised medicine18
- Precision medicine18
- Protein structures18
- Biological modelling17
- Biological system modelling17
- Systems biology17
- Systems modelling17
- Metabolic network modelling16
- Metabolic network reconstruction16
- Metabolic network simulation16
- Metabolic pathway modelling16
- Metabolic pathway reconstruction16
- Metabolic pathway simulation16
- Metabolic reconstruction16
- Omics15
- RNA-Seq analysis15
- Active learning14
- Biological models14
- Biological networks14
- Biological pathways14
- Cellular process pathways14
- Chromosome walking14
- Clone verification14
- Community analysis14
- DNA-Seq14
- DNase-Seq14
- Disease pathways14
- Ensembl learning14
- Environmental information processing pathways14
- Environmental microbiology14
- Function analysis14
- Functional analysis14
- Gene regulatory networks14
- Genetic information processing pathways14
- High throughput sequencing14
- High-throughput sequencing14
- Interactions14
- Interactome14
- Kernel methods14
- Knowledge representation14
- Machine learning14
- Metabolic pathways14
- Metagenomics14
- Microbial ecology14
- Microbiome14
- Molecular community analysis14
- Molecular interactions14
- Molecular interactions, pathways and networks14
- NGS14
- NGS data analysis14
- Networks14
- Neural networks14
- Next gen sequencing14
- Next generation sequencing14
- Panels14
- Pathways14
- Primer walking14
- Recommender system14
- Reinforcement learning14
- Sanger sequencing14
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- Signal transduction pathways14
- Signaling pathways14
- Supervised learning14
- Targeted next-generation sequencing panels14
- Unsupervised learning14
- Comparative transcriptomics13
- Data archival13
- Data archiving13
- Data curation13
- Data curation and archival13
- Data preservation13
- Data visualisation13
- Database curation13
- Research data archiving13
- Transcriptome13
- Transcriptomics13
- Antimicrobial stewardship12
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Event type
- Workshops and courses7
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Country
- United Kingdom1
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Target audience
- This course is aimed at scientists working with biomage data across the life sciences. It is suitable for those involved in creating bioimages or taking their first steps in analysis. The content would also be suitable for those wanting to learn more about the BioImage Archive and gain experience with machine learning approaches for image analysis. The programme will be of particular interest to bioimage analysts with questions relating to the use of ‘big data’ and using the wealth of publically available data curated in the BioImage Archive. The course should be accessible to members of the bioimaging community and does not require prior experience with machine learning methods or use of the BioImage Archive. Applicants are encouraged to explore the resources below before starting their application. Applicants should be comfortable with basic programming tasks and have experience working with Python. Prerequisite reading: BioImage Archive: A call for public archives for biological image data ZeroCostDL4Mic: an open platform to simplify access and use of Deep-Learning in Microscopy The BioStudies database - one stop shop for all data supporting a life sciences study EMPIAR: a public archive for raw electron microscopy image data Image Data Resource: a bioimage data integration and publication platform BioImage Model Zoo 1
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