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Keyword
- ChIP-seq2
- R2
- R Studio2
- RNA-seq2
- Single Cell Genomics2
- Variant detection2
- bioinformatics2
- next-generation sequencing2
- R-programming1
- Bioinformatics1
- Data Visualization1
- Data analysis1
- Data handling1
- Data visualisation1
- Life science1
- R software1
- RStudio1
- Seurat1
- Single Cell technologies1
- scRNAseq1
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Scientific topic
- Bioinformatics3
- Exomes3
- Genome annotation3
- Genomes3
- Genomics3
- MicroRNA sequencing3
- Personal genomics3
- RNA sequencing3
- RNA-Seq3
- RNA-Seq analysis3
- Small RNA sequencing3
- Small RNA-Seq3
- Small-Seq3
- Synthetic genomics3
- Transcriptome profiling3
- Viral genomics3
- WTSS3
- Whole genomes3
- Whole transcriptome shotgun sequencing3
- miRNA-seq3
- ChIP-exo2
- ChIP-seq2
- ChIP-sequencing2
- Chip Seq2
- Chip sequencing2
- Chip-sequencing2
- Chromosome walking2
- Clone verification2
- DNA variation2
- DNA-Seq2
- DNase-Seq2
- Data rendering2
- Data visualisation2
- De novo genome sequencing2
- Genetic variation2
- Genome sequencing2
- Genomic variation2
- High throughput sequencing2
- High-throughput sequencing2
- Mutation2
- NGS2
- NGS data analysis2
- Next gen sequencing2
- Next generation sequencing2
- Panels2
- Polymorphism2
- Primer walking2
- Sanger sequencing2
- Sequencing2
- Somatic mutations2
- Targeted next-generation sequencing panels2
- WGS2
- Whole genome resequencing2
- Whole genome sequencing2
- Bayesian methods1
- Biostatistics1
- Cloud computing1
- Computer science1
- Data analysis1
- Data architecture1
- Data architecture, analysis and design1
- Data design1
- Data management1
- Descriptive statistics1
- Gaussian processes1
- HPC1
- High performance computing1
- High-performance computing1
- Inferential statistics1
- Markov processes1
- Metadata management1
- Multivariate statistics1
- Probabilistic graphical model1
- Probability1
- Statistics1
- Statistics and probability1
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Operation
- Visualisation
- Data handling42
- File handling42
- File processing42
- Processing42
- Report handling42
- Utility operation42
- Data deposition22
- Data submission22
- Database deposition22
- Database submission22
- Deposition16
- Submission16
- Analysis9
- Allele calling7
- Exome variant detection7
- Genome variant detection7
- Germ line variant calling7
- Mutation detection7
- Somatic variant calling7
- Variant calling7
- Variant mapping7
- de novo mutation detection7
- Data brokering6
- Data deposition brokering6
- Data visualisation6
- Molecular visualisation6
- Plotting6
- Rendering6
- Data formatting3
- Data reformatting3
- File format conversion3
- File formatting3
- File reformatting3
- Format conversion3
- Functional genome annotation3
- Genome annotation3
- Metagenome annotation3
- Structural genome annotation3
- Consensus-based sequence alignment2
- Constrained sequence alignment2
- Data extraction2
- Data filtering2
- Data management planning2
- Data retrieval2
- Data retrieval (metadata)2
- Docking simulation2
- Expression analysis2
- Expression data analysis2
- File format validation2
- Format validation2
- Gene expression analysis2
- Gene expression data analysis2
- Gene expression regulation analysis2
- Genetic variation analysis2
- Genetic variation annotation2
- Macromolecular docking2
- Metadata retrieval2
- Metagenomic inference2
- Microarray data analysis2
- Molecular docking2
- Molecular surface analysis2
- Multiple sequence alignment (constrained)2
- Oligonucleotide alignment2
- Oligonucleotide alignment construction2
- Oligonucleotide alignment generation2
- Oligonucleotide mapping2
- Peak calling2
- Peak-pair calling2
- Protein binding peak detection2
- Protein expression analysis2
- Read alignment2
- Read mapping2
- Read pre-processing2
- Retrieval2
- Sequence alignment2
- Sequence alignment (constrained)2
- Sequence alignment construction2
- Sequence alignment generation2
- Sequence filtering2
- Sequence read pre-processing2
- Sequence variation analysis2
- Short oligonucleotide alignment2
- Short read alignment2
- Short read mapping2
- Short sequence read mapping2
- Structure database search2
- Transcript variant analysis2
- Variant analysis2
- rRNA filtering2
- Alternative splicing analysis1
- Alternative splicing detection1
- Alternative splicing prediction1
- Annotation1
- Biological pathway analysis1
- Biological pathway modelling1
- Biological pathway prediction1
- Breakend assembly1
- Cartography1
- Classification1
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Event type
- Workshops and courses6
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Country
- France2
- Belgium1
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Organizer
- Australian BioCommons2
- ABiMS (http://abims.sb-roscoff.fr/), AVIESAN (http://www.aviesan.fr/en), BiGEst (http://bigest.unistra.fr/), IFB (https://www.france-bioinformatique.fr/), IFB Core (https://www.france-bioinformatique.fr/), MIGALE (https://migale.inrae.fr)1
- Aviesan ITMO GGB, Inserm, IFB1
- Bioconductor1
- Vincenza Colonna (CNR), Loredana Le Pera (CNR), Allegra Via (CNR)1
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Target audience
- Cette formation est destinée aux biologistes (ingénieurs, doctorants, chercheurs, enseignants-chercheurs, praticiens…) confrontés à l’analyse de données NGS, et qui ne disposent pas des compétences bioinformatiques suffisantes.2
- Beginners1
- Bioinformaticians1
- Bioinformaticians and Biologists who want to learn how to manipulate, process data, and make plots using R1
- Biologists1
- Life Science Researchers1
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