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Content provider
- Australian BioCommons15
- ELIXIR Slovenia5
- BioData.pt4
- BioExcel3
- ELIXIR-SI eLearning Platform (EeLP)2
- ELIXIR: The Czech Republic Node2
- INB: Spanish National Bioinformatics Institute2
- NBIS2
- ELIXIR1
- ELIXIR Norway1
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- IFB French Institute of Bioinformatics1
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Keyword
- Bioinformatics8
- EeLP7
- Workflows7
- eLearning7
- life sciences6
- Nextflow5
- training5
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- data management4
- Computer science3
- QSAR3
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- molecular modelling3
- nf-core3
- pharmacophore3
- storage3
- R-programming2
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- Chemical biology (chemical-biology)2
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- Train the Trainer2
- Train trainer2
- Trainer skills2
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- Transcriptomics2
- TtT2
- data organisation2
- data publication2
- data stewardship2
- drug discovery2
- ethical issues2
- metadata2
- molecular docking2
- open access2
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- scRNAseq2
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- Metabolomics1
- RNA-Seq1
- AlphaFold1
- C13 Labeling Fluxomics1
- ChEMBL1
- ChEMBL: Bioactive data for drug discovery (5496)1
- Cloud Computing1
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- Computational Biology1
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- Curriculum development, course design, learning outcomes, Bloom's Taxonomy, assessment, course evaluation, training trainers, training material1
- DMP tools1
- Data Science1
- Data Stewardship Wizard1
- Data Visualization1
- Data analysis1
- Data handling1
- Data managment plan1
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- ELIXIR Training Platform1
- ELIXIR-CONVERGE1
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- Genetics1
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Scientific topic
- Bioinformatics11
- Data management11
- Metadata management11
- Pipelines7
- Software integration7
- Tool integration7
- Tool interoperability7
- Workflows7
- Cloud computing6
- Computer science6
- HPC6
- High performance computing6
- High-performance computing6
- MicroRNA sequencing5
- RNA sequencing5
- RNA-Seq5
- RNA-Seq analysis5
- Research data management (RDM)5
- Small RNA sequencing5
- Small RNA-Seq5
- Small-Seq5
- Transcriptome profiling5
- WTSS5
- Whole transcriptome shotgun sequencing5
- miRNA-seq5
- Comparative transcriptomics4
- Data curation4
- Database curation4
- Transcriptome4
- Transcriptomics4
- Active learning3
- Data rendering3
- Data visualisation3
- Ensembl learning3
- Exomes3
- Genome annotation3
- Genomes3
- Genomics3
- Kernel methods3
- Knowledge representation3
- Machine learning3
- Neural networks3
- Personal genomics3
- Recommender system3
- Reinforcement learning3
- Supervised learning3
- Synthetic genomics3
- Unsupervised learning3
- Viral genomics3
- Whole genomes3
- Biomathematics2
- Biomolecular structure2
- Codon usage2
- Comparative modelling2
- Computational biology2
- Computational structural biology2
- DNA chips2
- DNA microarrays2
- Data acquisition2
- Data archival2
- Data archiving2
- Data collecting2
- Data collection2
- Data curation and archival2
- Data gathering2
- Data preservation2
- Data provenance2
- Data submission, annotation, and curation2
- Docking2
- Drug development2
- Drug development science2
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- FAIR data2
- Findable, accessible, interoperable, reusable data2
- Gene expression2
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- Laboratory experiments2
- Laboratory method2
- Laboratory techniques2
- Mathematical biology2
- Medicine development2
- Medicines development2
- Molecular docking2
- Molecular modelling2
- Molecular structure2
- Research data archiving2
- Structural bioinformatics2
- Structure analysis2
- Structure data resources2
- Structure databases2
- Structures2
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Operation
- Data handling7
- File handling7
- File processing7
- Processing7
- Report handling7
- Utility operation7
- Analysis3
- Data deposition3
- Data submission3
- Data visualisation3
- Database deposition3
- Database submission3
- Molecular visualisation3
- Plotting3
- Rendering3
- Visualisation3
- Data brokering2
- Data deposition brokering2
- Data formatting2
- Data reformatting2
- Docking simulation2
- File format conversion2
- File formatting2
- File reformatting2
- Format conversion2
- Macromolecular docking2
- Molecular docking2
- Molecular surface analysis2
- Structure database search2
- Biological pathway analysis1
- Biological pathway modelling1
- Biological pathway prediction1
- Data filtering1
- Deposition1
- Expectation maximisation1
- File format validation1
- Format validation1
- Functional clustering1
- Functional pathway analysis1
- Functional sequence clustering1
- Gibbs sampling1
- Hypothesis testing1
- Molecular dynamics1
- Molecular dynamics simulation1
- Omnibus test1
- Pathway analysis1
- Pathway comparison1
- Pathway modelling1
- Pathway prediction1
- Pathway simulation1
- Protein dynamics1
- Protein secondary structure visualisation1
- RNA secondary structure visualisation1
- Sequence filtering1
- Significance testing1
- Statistical analysis1
- Statistical calculation1
- Statistical test1
- Statistical testing1
- Structure analysis1
- Structure rendering1
- Structure visualisation1
- Submission1
- rRNA filtering1
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Venue
- 17. listopadu 1192/12, 12 17. listopadu1
- 17. listopadu, 17. listopadu1
- Instituto de Medicina Molecular (IMM), Avenida Professor Egas Moniz1
- Norway1
- On Line - ZOOM platform1
- On line event1
- Online via Zoom1
- Palacky University Olomouc (UPOL) Faculty of Science tř. 17. listopadu 12, Olomouc 77900, Czech Republic rooms 3.002 (tutorials/challenge), 3.003 (lectures)1
- University of Ljubljana, Faculty of Medicine1
- Uppsala University, SciLifeLab, BMC, Husargatan 3, Uppsala1
- Wyndham Garden Berlin Mitte, 116A Osloer Straße1
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Organizer
- Australian BioCommons15
- BioData.pt3
- ELIXIR Norway3
- ELIXIR Slovenia, ELIXIR Sweden, NBIS3
- Karel Berka, Pavel Polishchuk3
- BioExcel2
- Earlham Institute2
- European Joint Programme on Rare Diseases (EJP-RD), Istituto Superiore di Sanità of Italy2
- Barcelona Supercomputing Center (BSC), EMBL-European Bioinformatics Institute (EMBL-EBI), Izmir Biomedicine and Genome Center (IBG), INCLIVA Health Research Institute, Spanish National Bioinformatics Institute (INB/ELIXIR-ES)1
- BioData.pt, iMM - Instituto de Medicina Molecular João Lobo Antunes1
- Bologna Biocomputing Group1
- Computational Biology Facility, University of Liverpool: https://www.liverpool.ac.uk/computational-biology-facility/1
- ELIXIR Norway, Digital Life Norway1
- ELIXIR Slovenia1
- ELIXIR-GR (FORTH/ICE-HT) in collaboration with ELIXIR-ES (UB) 1
- ELIXIR-IT (L. Le Pera, V. Colonna, A. Via), Carpentries Italia1
- ELIXIR-NO, ELIXIR-SE (NBIS), ELIXIR-SI, ELIXIR-FR (INRAE)1
- EMBO1
- ETHZ, EPFL1
- Emma Lazzeri, Loredana Le Pera, Ivan Miçetic, Gina Pavone, Allegra Via1
- FAIRDOM (https://fair-dom.org)1
- German Human Genome Phenome Archive1
- INB/ELIXIR-ES and Barcelona Supercomputing Center (BSC)1
- IOCB Prague, University of Ljubljana, Faculty of Medicine, ELIXIR-FI1
- International Bologna Master in Bioinformatics; Interdepartmental Centre Alma Climate; Dep. of Pharmacy and Biotechnology - Univ. of Bologna; SIB; Accademia delle Scienze dell'Istituto di Bologna1
- Loredana Le Pera IBIOM/IBPM-CNR, Allegra Via IBPM-CNR1
- Master's in Bioinformatics - University of Bologna1
- NBIS1
- NBIS, SciLifeLab1
- NBIS, SciLifeLab Data Centre1
- Olivier Sand1
- Open Life Science1
- Pedro L Fernandes1
- University of Bologna - Biocomputing group1
- University of Bologna, ELIXIR-IIB, SIB, AIRBBC1
- Vincenza Colonna (CNR), Loredana Le Pera (CNR), Allegra Via (CNR)1
- de.KCD & de.NBI & BIH @ Charité1
- nf-core project1
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Sponsor
- ELIXIR CZ3
- Palacký University Olomouc3
- RDA-Portugal3
- Centre for Digital Life Norway2
- Aurora1
- Aurora Alliance1
- Australian BioCommons1
- Center for Experimental and Clinical Imaging Technologies Zurich (EXCITE Zurich)1
- ELIXIR1
- ELIXIR 1
- ELIXIR Converge1
- ELIXIR Training Platform1
- ELIXIR-CONVERGE1
- Genetics Society of AustralAsia1
- HPC Carpentry1
- Seqera1
- nf-core1
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Target audience
- PhD students15
- Life Science Researchers13
- Master students11
- Researchers11
- Technicians5
- Undergraduate students4
- Trainers3
- Training Designers3
- Training instructors3
- life scientists3
- All postgraduates2
- Biologists2
- Clinicians2
- PhD Students2
- PhD candidates2
- Post docs2
- Researcher in life sciences2
- database managers2
- healthcare professionals2
- medical specialists2
- registry curators2
- trainers2
- PhD students1
- rare disease patients representatives1
- Academics1
- Bioinformatician1
- Bioinformaticians1
- Bioinformaticians and Biologists who want to learn how to manipulate, process data, and make plots using R1
- Bioinformaticians and wet-lab biologists1
- Clinical Scientists1
- Core Facility Managers1
- Data Managers1
- Data stewards1
- ECR1
- Early Career Researcher1
- Educators1
- Evolutionary Biologists1
- HPC users1
- Life scientists1
- Mainly graduate students and Junior post-docs, of either experimental or computational background, with basic training in life sciences, or (bio)chemistry, or physics, or mathematics, or engineering1
- Masters students1
- PI1
- PhD Scholars, Graduates and Post Graduates, Professors, Associate Professors, Assistant Professors, Bio instruments Professionals, Bio-informatics Professionals, Directors, CEO’s of Organizations, Supply Chain companies, Manufacturing Companies, Software development companies, Research Institutes and members1
- PhD candidate1
- Post Docs1
- Post-Docs1
- PostDocs1
- Postdoctoral researchers1
- Professors1
- Technologists1
- The workshop is designed for anyone who is creating workflows, either via platforms like Galaxy Australia, or via the command line.1
- Training Coordinators1
- Training Organisers1
- bioinformaticians1
- data managers1
- data steward / data manager1
- data stewards1
- post-docs1
- project manager1
- rare disease patients representatives1
- research software engineers and research data managers working with ELIXIR-supported tools and resources1
- teachers1
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Language
- English4
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