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Content provider
- IFB French Institute of Bioinformatics4
- ELIXIR Slovenia1
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Scientific topic
- Exomes3
- Genome annotation3
- Genomes3
- Genomics3
- Personal genomics3
- Synthetic genomics3
- Viral genomics3
- Whole genomes3
- Bioinformatics2
- ChIP-exo2
- ChIP-seq2
- ChIP-sequencing2
- Chip Seq2
- Chip sequencing2
- Chip-sequencing2
- Chromosome walking2
- Clone verification2
- DNA variation2
- DNA-Seq2
- DNase-Seq2
- De novo genome sequencing2
- Genetic variation2
- Genome sequencing2
- Genomic variation2
- High throughput sequencing2
- High-throughput sequencing2
- MicroRNA sequencing2
- Mutation2
- NGS2
- NGS data analysis2
- Next gen sequencing2
- Next generation sequencing2
- Panels2
- Polymorphism2
- Primer walking2
- RNA sequencing2
- RNA-Seq2
- RNA-Seq analysis2
- Sanger sequencing2
- Sequencing2
- Small RNA sequencing2
- Small RNA-Seq2
- Small-Seq2
- Somatic mutations2
- Targeted next-generation sequencing panels2
- Transcriptome profiling2
- WGS2
- WTSS2
- Whole genome resequencing2
- Whole genome sequencing2
- Whole transcriptome shotgun sequencing2
- miRNA-seq2
- Exometabolomics1
- LC-MS-based metabolomics1
- MS-based metabolomics1
- MS-based targeted metabolomics1
- MS-based untargeted metabolomics1
- Mass spectrometry-based metabolomics1
- Metabolites1
- Metabolome1
- Metabolomics1
- Metabonomics1
- NMR-based metabolomics1
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Operation
- Consensus-based sequence alignment2
- Constrained sequence alignment2
- Data visualisation2
- Expression analysis2
- Expression data analysis2
- Gene expression analysis2
- Gene expression data analysis2
- Gene expression regulation analysis2
- Genetic variation analysis2
- Genetic variation annotation2
- Metagenomic inference2
- Microarray data analysis2
- Molecular visualisation2
- Multiple sequence alignment (constrained)2
- Oligonucleotide alignment2
- Oligonucleotide alignment construction2
- Oligonucleotide alignment generation2
- Oligonucleotide mapping2
- Peak calling2
- Peak-pair calling2
- Plotting2
- Protein binding peak detection2
- Protein expression analysis2
- Read alignment2
- Read mapping2
- Read pre-processing2
- Rendering2
- Sequence alignment2
- Sequence alignment (constrained)2
- Sequence alignment construction2
- Sequence alignment generation2
- Sequence read pre-processing2
- Sequence variation analysis2
- Short oligonucleotide alignment2
- Short read alignment2
- Short read mapping2
- Short sequence read mapping2
- Transcript variant analysis2
- Variant analysis2
- Visualisation2
- Allele calling1
- Exome variant detection1
- Genome variant detection1
- Germ line variant calling1
- Mutation detection1
- Somatic variant calling1
- Variant calling1
- Variant mapping1
- de novo mutation detection1
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Event type
- Workshops and courses6
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Organizer
- ABiMS (http://abims.sb-roscoff.fr/), AVIESAN (http://www.aviesan.fr/en), BiGEst (http://bigest.unistra.fr/), IFB (https://www.france-bioinformatique.fr/), IFB Core (https://www.france-bioinformatique.fr/), MIGALE (https://migale.inrae.fr)1
- Aviesan ITMO GGB, Inserm, IFB1
- ELIXIR-BE, ELIXIR-FR, ELIXIR-NO, ELIXIR-PT, ELIXIR-SE, ELIXIR-SI1
- INRA, URGI platform1
- L’Institut Français de Bioinformatique (IFB), ELIXIR-FR1
- W4M coreteam1
- Workflow4metabolomics - 2021 session postponed to 2022, march (https://workflow4metabolomics.org/w4e2021)1
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Target audience
- Cette formation est destinée aux biologistes (ingénieurs, doctorants, chercheurs, enseignants-chercheurs, praticiens…) confrontés à l’analyse de données NGS, et qui ne disposent pas des compétences bioinformatiques suffisantes.2
- Bioinformatician, Bioanalysts1
- Biologists1
- Chemists1
- Life Science Researchers1
- PhD students1
- Researchers1
- life scientists1
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