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- European Bioinformatics Institute (EBI)8
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Target audience
- The course is suitable for graduate students and young researchers with a background in biology who are keen to become proficient bioinformaticians within the fields of genomics and/or transcriptomics. We will start with the basics, so students with no prior programming knowledge are welcome. We have a number of Linux computers that you can use, and you can bring your own laptops*. Please note this course will be taught in English, however the trainers are fluent in either Spanish or Portuguese, and can offer language support where feasible. A number of travel fellowships are available for this course - early-stage researchers and researchers from underrepresented groups are especially encouraged to apply for CABANA travel fellowships. You can apply for travel fellowships via the course application form. *If you bring your own laptop (any operating system is fine), you must have installed the following programs: R (at least version 3.5), the latest Rstudio and Bioconductor. To download R please visit: https://www.r-project.org/ To download RStudio please visit: https://www.rstudio.com/products/rstudio/download/ Bioconductor must be downloaded and installed via R, instructions on how to do this can be found here: https://www.bioconductor.org/install/1
- This course is aimed at researchers from postgraduate level upwards interested in using R to analyse genomics data for crop biodiversity studies. Please note this course will be taught in English, however the trainers are fluent in Spanish, and can offer language support where feasible. A number of travel fellowships are available for this course - early-stage researchers and researchers from underrepresented groups are especially encouraged to apply for CABANA travel fellowships. You can apply for travel fellowships via the course application form. Prerequisites An undergraduate level degree in plant biology or a related discipline would be an advantage. You will need to know basic commands in R in order to get the most from this course, though a review of basic concepts and commands in R will be covered on the first day. You can find a good introduction to R here: http://www.r-tutor.com/r-introduction You will also need to bring a laptop with R installed and working knowledge of how to navigate your working directory effectively using R commands. To download R please visit: https://www.r-project.org/ To download RStudio please visit: https://www.rstudio.com/products/rstudio/download/1
- This course is suitable for postgraduate wet-lab researchers at any career stage within Latin America who are working with and/or generating their own transcriptomic datasets. Participants will require a basic knowledge of the Unix command line and the R statistical package. We recommend these free tutorials: Basic introduction to the Unix environment: www.ee.surrey.ac.uk/Teaching/Unix Introduction and exercises for Bio-Linux 7: http://nebc.nerc.ac.uk/support/training/course-notes/past-notes/intro-bl7 Basic R concept tutorials: www.r-tutor.com/r-introduction Participants without basic knowledge of these resources will have difficulty in completing the practical sessions. We strongly recommend that you make every effort to access these materials and other training available online or within your host institute to best prepare you for the course. A number of travel fellowships are available for this course - early-stage researchers and researchers from underrepresented groups are especially encouraged to apply for CABANA travel fellowships. You can apply for travel fellowships via the course application form.1
- This workshop is suitable for researchers working in Latin American countries. Early career researchers, including graduate students, postdocs and professors working, or planning to start working in Chemoinformatics, are warmly encouraged to apply. This workshop will be located in a room with computers however we recommend participants bring their own laptops. A number of travel fellowships are available for this course - early-stage researchers and researchers from underrepresented groups are especially encouraged to apply for CABANA travel fellowships. You can apply for travel fellowships via the course application form. Prerequisites: Undergraduate-level knowledge of chemical and protein structures are required. Familiarity with basic chemoinformatics concepts and notions of programming (R, Python and/or UNIX) are recommended. Please note this course will be taught in English, however, the trainers are fluent in Spanish and can offer language support where needed.1
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