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- IFB French Institute of Bioinformatics
- Software Carpentry1663
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- ELXIR-UK DaSH6
- German Human Genome Phenome Archive (GHGA)6
- ABACBS5
- Babraham Institute Bioinformatics Group5
- NRIS5
- Thermo Fisher Scientific5
- CodeRefinery4
- NEOF Training4
- de.KCD4
- Bioconductor3
- Centre for Genomic Regulation (CRG)2
- ELIXIR Hungary2
- FAIRDOM2
- Jalview2
- QCIF2
- The Center for Professional Innovation and Education2
- UCL Engineering2
- CINECA PROJECT1
- EOSC4Cancer1
- Foundation for Research & Technology Hellas / Institute of Chemical Engineering Sciences (FORTH/ICE-HT)1
- GOBLET1
- LIPID MAPS1
- NORBIS, the Norwegian national research school in bioinformatics, biostatistics and systems biology1
- Proteomics Academy1
- RiskGONE1
- Seqera Labs1
- UCLouvain Bioinformatics Platform1
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Keyword
- metadata3
- ChIP-seq2
- Data management plan2
- RNA-seq2
- Single Cell Genomics2
- Variant detection2
- bioinformatics2
- data organisation2
- licensing2
- life science standards2
- next-generation sequencing2
- storage2
- FAIR1
- Galaxy1
- MCPD1
- MIAPPE1
- Metabolomics1
- Ontology1
- R-programming1
- biostatistics1
- crop ontology1
- data collection1
- machine learning1
- omics data1
- plants1
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Scientific topic
- Bioinformatics4
- Aerobiology2
- Behavioural biology2
- Biological rhythms2
- Biological science2
- Biology2
- ChIP-exo2
- ChIP-seq2
- ChIP-sequencing2
- Chip Seq2
- Chip sequencing2
- Chip-sequencing2
- Chromosome walking2
- Chronobiology2
- Clone verification2
- Cryobiology2
- DNA variation2
- DNA-Seq2
- DNase-Seq2
- Data management2
- De novo genome sequencing2
- Exomes2
- FAIR data2
- Findable, accessible, interoperable, reusable data2
- Genetic variation2
- Genome annotation2
- Genome sequencing2
- Genomes2
- Genomic variation2
- Genomics2
- High throughput sequencing2
- High-throughput sequencing2
- Metadata management2
- MicroRNA sequencing2
- Mutation2
- NGS2
- NGS data analysis2
- Next gen sequencing2
- Next generation sequencing2
- Open science2
- Panels2
- Personal genomics2
- Polymorphism2
- Primer walking2
- RNA sequencing2
- RNA-Seq2
- RNA-Seq analysis2
- Reproductive biology2
- Research data management (RDM)2
- Sanger sequencing2
- Sequencing2
- Small RNA sequencing2
- Small RNA-Seq2
- Small-Seq2
- Somatic mutations2
- Synthetic genomics2
- Targeted next-generation sequencing panels2
- Transcriptome profiling2
- Viral genomics2
- WGS2
- WTSS2
- Whole genome resequencing2
- Whole genome sequencing2
- Whole genomes2
- Whole transcriptome shotgun sequencing2
- miRNA-seq2
- Active learning1
- Ensembl learning1
- Exometabolomics1
- Kernel methods1
- Knowledge representation1
- LC-MS-based metabolomics1
- MS-based metabolomics1
- MS-based targeted metabolomics1
- MS-based untargeted metabolomics1
- Machine learning1
- Mass spectrometry-based metabolomics1
- Metabolites1
- Metabolome1
- Metabolomics1
- Metabonomics1
- NMR-based metabolomics1
- Neural networks1
- Recommender system1
- Reinforcement learning1
- Supervised learning1
- Unsupervised learning1
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Operation
- Consensus-based sequence alignment2
- Constrained sequence alignment2
- Data visualisation2
- Expression analysis2
- Expression data analysis2
- Gene expression analysis2
- Gene expression data analysis2
- Gene expression regulation analysis2
- Genetic variation analysis2
- Genetic variation annotation2
- Metagenomic inference2
- Microarray data analysis2
- Molecular visualisation2
- Multiple sequence alignment (constrained)2
- Oligonucleotide alignment2
- Oligonucleotide alignment construction2
- Oligonucleotide alignment generation2
- Oligonucleotide mapping2
- Peak calling2
- Peak-pair calling2
- Plotting2
- Protein binding peak detection2
- Protein expression analysis2
- Read alignment2
- Read mapping2
- Read pre-processing2
- Rendering2
- Sequence alignment2
- Sequence alignment (constrained)2
- Sequence alignment construction2
- Sequence alignment generation2
- Sequence read pre-processing2
- Sequence variation analysis2
- Short oligonucleotide alignment2
- Short read alignment2
- Short read mapping2
- Short sequence read mapping2
- Transcript variant analysis2
- Variant analysis2
- Visualisation2
- Allele calling1
- Exome variant detection1
- Genome variant detection1
- Germ line variant calling1
- Mutation detection1
- Somatic variant calling1
- Variant calling1
- Variant mapping1
- de novo mutation detection1
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Venue
- 7 avenue Blaise Pascal10
- 24 chemin de borderouge CS 52627 – Auzeville4
- Auzeville-Tolosane4
- Montpellier4
- 911 avenue Agropolis3
- INRA de Toulouse/Auzeville3
- INRAE Occitanie Toulouse 24 Chemin de Borde Rouge3
- Place Georges Teissier3
- Centre INRAE, bâtiment 2332
- Inra, 24 ch. de Borderouge, Auzeville2
- 113 Rue Nationale1
- 180 chemin de Tournefeuille1
- 2 rue Gaston crémieux, Evry1
- 31 Chemin Joseph Aiguier, 13009 Marseille.1
- 7, avenue Blaise Pascal1
- Aussois1
- Bordeaux1
- CAES du CNRS La Villa Clythia 2754, avenue Henri-Giraud 83600 Fréjus1
- CBiB, Bordeaux1
- Clermont-Ferrand - Université d'Auvergne1
- ENS Lyon1
- Henri Poinricaré, Paris1
- INRA Auzeville, France1
- INRA, URGI, Bat 18 Route de SaintCyr RD101
- Illkirch, France1
- Institut Henri Poincaré, Paris, France1
- Institut Pasteur1
- Institut Pasteur 25-28 rue du Dr Roux 75015 Paris1
- Jouy en Josas1
- Paris, France1
- ROSCOFF1
- Rennes1
- Salle 159 Batiment 3 CIRAD Lavalette, Avenue Agropolis1
- Station Biologique De Roscoff1
- Station Biologique De Roscoff, Place Georges Teissier1
- The Hague, Netherlands1
- avenue Agropolis1
- avenue agropolis1
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City
- Montpellier16
- Roscoff14
- Clermont-Ferrand11
- Paris7
- castanet-tolosan4
- Castanet Tolosan3
- Strasbourg3
- Institut Pasteur Paris2
- Jouy-en-Josas2
- 1 avenue de la terasse, Gif-sur-Yvette1
- 3 rue Michel Ange, 75016 Paris1
- Auditorium Biopark, Paris1
- Aussois1
- Bâtiment Lwoff – Salle retrovirus, Institut Pasteur, Paris1
- CLERMONT-FERRAND1
- Carry le Rouet1
- Fondation Victor Lyon, Cité Internationale Universitaire de Paris1
- Fréjus1
- Genoa, Italy1
- Gif sur Yvette1
- Hague1
- INRA de Jouy-en-Josas1
- IRISA Rennes1
- Jussieu (Paris 5ème)1
- Laboratoire MTi, Paris1
- Lyon1
- Marseille1
- Nantes1
- Paris, France1
- Plateau des Cézeaux, Aubière1
- Toulouse1
- Toulouse-Auzeville1
- Univ. Paris Diderot, Paris1
- Versailles1
- campus du Triolet, Université de Montpellier1
- montpellier1
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Country
- France66
- Netherlands1
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Organizer
- South Green (http://www.southgreen.fr)8
- AuBi (https://mesocentre.uca.fr/projets-associes/plateforme-aubi), AuBi (https://mesocentre.uca.fr/projets-associes/plateforme-aubi/), Mésocentre Clermont-Auvergne (https://mesocentre.uca.fr/)7
- Genotoul-bioinfo (http://bioinfo.genotoul.fr/), MIAT 0875 ()4
- ABiMS (http://abims.sb-roscoff.fr/), AVIESAN (http://www.aviesan.fr/en), BiGEst (http://bigest.unistra.fr/), IFB (https://www.france-bioinformatique.fr/), IFB Core (https://www.france-bioinformatique.fr/), MIGALE (https://migale.inrae.fr)3
- BiGEst (http://bigest.unistra.fr/), UPR2357 (http://www.ibmp.cnrs.fr/)3
- Genotoul-bioinfo (http://bioinfo.genotoul.fr/), MIAT (https://miat.inrae.fr/site/Accueil)3
- IFB Core (https://www.france-bioinformatique.fr/), IFB-core ()3
- https://catalogue.france-bioinformatique.fr/api/organisation/CNRS%20formation%20entreprises/?format=json-ld3
- ATGC (http://www.atgc-montpellier.fr/), CNRS formation entreprises (https://cnrsformation.cnrs.fr/)2
- AuBi (https://mesocentre.uca.fr/projets-associes/plateforme-aubi), AuBi (https://mesocentre.uca.fr/projets-associes/plateforme-aubi/), IFB (https://www.france-bioinformatique.fr/), IFB Core (https://www.france-bioinformatique.fr/)2
- AuBi (https://mesocentre.uca.fr/projets-associes/plateforme-aubi), AuBi (https://mesocentre.uca.fr/projets-associes/plateforme-aubi/), Université Clermont Auvergne (https://www.uca.fr/)2
- I2BC (http://www.i2bc.paris-saclay.fr/?lang=en), IFB-core ()2
- IFB (https://www.france-bioinformatique.fr/)2
- Institut Français de Bioinformatique (IFB)2
- ABiMS (http://abims.sb-roscoff.fr/)1
- ABiMS (http://abims.sb-roscoff.fr/), AVIESAN (http://www.aviesan.fr/en), BiGEst (http://bigest.unistra.fr/), IFB (https://www.france-bioinformatique.fr/), IFB Core (https://www.france-bioinformatique.fr/), INSERM (http://english.inserm.fr/), MIGALE (https://migale.inrae.fr)1
- ABiMS (http://abims.sb-roscoff.fr/), AVIESAN (http://www.aviesan.fr/en), Curie Bioinfo (http://u900.curie.fr), EBIO (http://ebio.u-psud.fr/), Genotoul-bioinfo (http://bioinfo.genotoul.fr/), IFB (https://www.france-bioinformatique.fr/), IFB Core (https://www.france-bioinformatique.fr/)1
- ABiMS (http://abims.sb-roscoff.fr/), AVIESAN (http://www.aviesan.fr/en), IFB (https://www.france-bioinformatique.fr/), IFB Core (https://www.france-bioinformatique.fr/)1
- ABiMS (http://abims.sb-roscoff.fr/), BiGEst (http://bigest.unistra.fr/), Genotoul-bioinfo (http://bioinfo.genotoul.fr/), IFB (https://www.france-bioinformatique.fr/), IFB Core (https://www.france-bioinformatique.fr/), INSERM (http://english.inserm.fr/), MIGALE (https://migale.inrae.fr), Pasteur HUB (https://research.pasteur.fr/en/team/bioinformatics-and-biostatistics-hub/)1
- ABiMS (http://abims.sb-roscoff.fr/), SBR (http://www.sb-roscoff.fr/en)1
- Aviesan ITMO GGB, Inserm, IFB1
- BioMAJ Hackaton ()1
- BioinfOmics (https://www.inrae.fr/infrastructures-recherche-au-sein-dinrae#anchor5_2), INRAE (https://www.inrae.fr/), MIGALE (https://migale.inrae.fr)1
- BioinfOmics (https://www.inrae.fr/infrastructures-recherche-au-sein-dinrae#anchor5_2), MIGALE (https://migale.inrae.fr)1
- Building a FAIR Bioinformatics environment (http://www.igst.it/nettab/2018/)1
- CIRAD (http://www.cirad.fr/en/home-page), INRAE (https://www.inrae.fr/), IRD (https://www.ird.fr), South Green (http://www.southgreen.fr)1
- CNRS (http://www.cnrs.fr/index.php), IFB (https://www.france-bioinformatique.fr/), INRA (http://www.inra.org.ma/accueil1.asp?codelangue=23&po=2), MethaboHub (https://www.metabohub.fr/)1
- Conference on recent developments in Metagenomic Research (https://metagenomic2016.sciencesconf.org/)1
- Dutch Techcentre for Life Sciences&the BioSB research school&ELIXIR1
- Elixir Board Meeting (https://www.elixir-europe.org/events/elixir-board-meeting-paris)1
- Elixir-FR (https://elixir-europe.org/about-us/who-we-are/nodes/france), IFB Core (https://www.france-bioinformatique.fr/), TAGC (https://tagc.univ-amu.fr/en/the-new-tagc-name)1
- Exploration de la Diversité Taxonomique des Ecosystèmes par Metabarcoding (https://anfmetabiodiv.mio.osupytheas.fr)1
- GCC 2017 (https://gcc2017.sciencesconf.org)1
- Genotoul-bioinfo (http://bioinfo.genotoul.fr/), Genotoul-biostat (https://perso.math.univ-toulouse.fr/biostat/), MIAT (https://miat.inrae.fr/site/Accueil)1
- I2BC (http://www.i2bc.paris-saclay.fr/?lang=en), IFB Core (https://www.france-bioinformatique.fr/), IFB-core ()1
- IFB (https://www.france-bioinformatique.fr/), IFB Core (https://www.france-bioinformatique.fr/)1
- IFB (https://www.france-bioinformatique.fr/), Institut Pasteur (http://www.pasteur.fr/en)1
- IFB (https://www.france-bioinformatique.fr/), PB-IBENS (https://www.ibens.ens.fr/?rubrique55)1
- IFB (https://www.france-bioinformatique.fr/), SIB (https://www.sib.swiss/)1
- IFB (https://www.france-bioinformatique.fr/), Université Paris-Diderot ()1
- INRA, URGI platform1
- INRAE1
- IRD (https://www.ird.fr), South Green (http://www.southgreen.fr)1
- Introduction à l'analyse de données métatranscriptomiques avec Galaxy (), https://catalogue.france-bioinformatique.fr/api/organisation/AuBi/?format=json-ld, https://catalogue.france-bioinformatique.fr/api/organisation/M%C3%A9socentre%20Clermont-Auvergne/?format=json-ld1
- Introduction à l'analyse d’images avec Galaxy (), https://catalogue.france-bioinformatique.fr/api/organisation/AuBi/?format=json-ld, https://catalogue.france-bioinformatique.fr/api/organisation/M%C3%A9socentre%20Clermont-Auvergne/?format=json-ld1
- Introduction à la segmentation des nucléoles et extraction de caractéristiques avec Galaxy (), https://catalogue.france-bioinformatique.fr/api/organisation/AuBi/?format=json-ld, https://catalogue.france-bioinformatique.fr/api/organisation/M%C3%A9socentre%20Clermont-Auvergne/?format=json-ld1
- JOBIM 2019 (https://jobim2019.sciencesconf.org/)1
- Journée de rencontre autour de Snakemake (https://c3bi.pasteur.fr/news-journee-snakemake/)1
- Journée thématique scientifique PF AuBi ()1
- Journées "ReproHackathon" ()1
- Launching ProteoRE infrastructure ()1
- Les journées de l'IFB 2019 (https://ifb-ag.sciencesconf.org)1
- MOD2018 (https://www.montpellier-omics-days.fr/)1
- MicroScope Open Days ()1
- Mini-workshop Web viewers (http://bioserv.rpbs.univ-paris-diderot.fr/events.html)1
- Olivier Sand1
- Reproductibilité des analyses de données bioinformatiques (https://ifb-elixirfr.github.io/ReproHackathon/pleniere2017)1
- Réunions IFB ()1
- UM (http://www.umontpellier.fr/en/)1
- Workflow4metabolomics - 2021 session postponed to 2022, march (https://workflow4metabolomics.org/w4e2021)1
- Workshop Web Viewers ()1
- https://catalogue.france-bioinformatique.fr/api/organisation/AVIESAN/?format=json-ld1
- mmc-idf : Plan de Mutualisation des Moyens de Calcul de l'INSERM (https://mmc-idf.sciencesconf.org/)1
- École EBAii Assemblage & Annotation / Assembly & Annotation EBAii school - Session 2022 (https://www.france-bioinformatique.fr/formation/ebaii2022_genomique/)1
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Target audience
- Biologists3
- Biomedical researchers2
- Cette formation est destinée aux biologistes (ingénieurs, doctorants, chercheurs, enseignants-chercheurs, praticiens…) confrontés à l’analyse de données NGS, et qui ne disposent pas des compétences bioinformatiques suffisantes.2
- bioinformaticians2
- health professionals2
- Bioinformatician, Bioanalysts1
- Chemists1
- Life Science Researchers1
- Master students1
- PhD students1
- Researchers1
- data managers1
- post-docs1
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