SIB Swiss Institute of Bioinformatics

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Showing 30 materials out of 96

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Introduction to Viral Bioinformatics

• beginner
genes and genomes infectious disease medicine and health services and resources training
Computer Software, workflow

How to use V-pipe (SARS-CoV-2 data)

• beginner
Virology Genetic variation Workflows Variant calling Alignment Read pre-processing coronavirus NGS bioinformatics Variant-calling
Training materials

Using bioinformatics to hunt SARS-CoV-2, its variants & its origins – a practical guide

• beginner
Bioinformatics for schools, basic bioinformatics, SARS-CoV-2 pandemic, genome analysis, protein sequence analysis, protein structure analysis, virus variants, spike protein, training material
e-learning

BLAST and multiple sequence alignment (MSA) programs

• beginner
Sequence analysis Blast Multiple sequence alignment
BLAST and multiple sequence alignment (MSA) programs

• beginner
Blast E learning Multiple sequence alignment
e-learning

UNIX Fundamentals

• beginner
Computer science Problem based learning Programming Unix
Tutorial, Slideshow, e-learning

High Performance Computing (HPC) in Life Sciences

• beginner
Computer science Bioinformatics Biology High performance computing high-performance computing
e-learning

ISMARA: A tool to infer genome-wide regulatory interactions

• beginner
Systems biology Gene regulation Transcription factors and regulatory sites Computational modelling
e-learning

Cellosaurus : A resource on cell lines

• beginner
Biosciences Experimental design and studies basic research Reproducibility cell line
First Steps with Python in Life Sciences

• beginner
data management data visualisation programming reproducibility training torsten schwede & thierry sengstag group mark ibberson group
e-learning

neXtProt : Exploring human proteins

• beginner
Proteins Proteomics Proteins (proteins) human
Version Control with Git

• beginner
programming,reproducibility,data management programming,reproducibility,data management,training
Vital-IT Infrastructure Usage
e-learning

Explore and Visualize Your Data with Python

•• intermediate
Data visualisation Bioinformatics Python Data analysis
Introduction to 3D-Structure Visualization and Homology Modeling using the Swiss-Model Workspace
Cancer Variant Analysis

•• intermediate
First Steps with R in Life Sciences

• beginner
training,biostatistics,data visualisation,programming,mark ibberson group training,biostatistics,data visualisation,programming,torsten schwede & thierry sengstag group
Single-Cell Transcriptomics with R

•• intermediate
genes and genomes biochemistry biomarkers experimental biology functional genomics next generation sequencing population genomics single-cell biology training transcriptomics mauro delorenzi & frédéric schütz group
Introduction to Large Language Models for Life Scientists

• beginner
machine learning mark ibberson group training
R Basics Quiz

• beginner
Diving into deep learning - theory and applications with PyTorch

•• intermediate
ViralZone

Phylogenetics of animal viral pathogens

• beginner
Animal pathogens E learning Phylogenetics
Introduction to Bayesian Statistics with R

•• intermediate
biostatistics training
Discover ViralZone

• beginner
genes and genomes infectious disease medicine and health services and resources training alan bridge group
NGS - Quality Control, Alignment, Visualisation

• beginner
training genes and genomes next generation sequencing environmental science medicine and health
Video, E-learning

FAIR principles in practice for health data

• beginner
Computer science Data management FAIR data Medical informatics Standardisation and normalisation Design Clinical data RDF Knowledge graph Semantic framework FAIR Findability Accessibility Interoperability Reusability
neXtProt : Exploring human proteins
ISMARA: A tool to infer genome-wide regulatory interactions
Querying SIB resources with SPARQL
SARS-CoV-2 : Studying a new virus

Showing 30 events out of 59 (also found 516 past events)

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Introduction to Viral Bioinformatics

How to use V-pipe (SARS-CoV-2 data)

Using bioinformatics to hunt SARS-CoV-2, its variants & its origins – a practical guide

BLAST and multiple sequence alignment (MSA) programs

BLAST and multiple sequence alignment (MSA) programs

UNIX Fundamentals

High Performance Computing (HPC) in Life Sciences

ISMARA: A tool to infer genome-wide regulatory interactions

Cellosaurus : A resource on cell lines

First Steps with Python in Life Sciences

neXtProt : Exploring human proteins

Version Control with Git

Vital-IT Infrastructure Usage

Explore and Visualize Your Data with Python

Introduction to 3D-Structure Visualization and Homology Modeling using the Swiss-Model Workspace

Cancer Variant Analysis

First Steps with R in Life Sciences

Single-Cell Transcriptomics with R

Introduction to Large Language Models for Life Scientists

R Basics Quiz

Diving into deep learning - theory and applications with PyTorch

Phylogenetics of animal viral pathogens

Introduction to Bayesian Statistics with R

Discover ViralZone

NGS - Quality Control, Alignment, Visualisation

FAIR principles in practice for health data

neXtProt : Exploring human proteins

ISMARA: A tool to infer genome-wide regulatory interactions

Querying SIB resources with SPARQL

SARS-CoV-2 : Studying a new virus

Data Visualisation with R

ViralZone and the Revolution in 3D Virus Structure

Reproducible and Scalable Research with Snakemake and Software Containers

Data Analysis and Representation in Python

First Steps with R in Life Sciences

Diving into deep learning - theory and applications with PyTorch

Statistics and Machine Learning for Life Sciences

Introduction to Machine Learning with Python

Introduction to Machine Learning with Python

Ensuring More Accurate, Generalisable, and Interpretable Machine Learning Models for Bioinformatics

Introduction to High-performance Computing (sciCORE Cluster)

First Steps with R in Life Sciences

Introduction to Statistics with R

Multiomics Data Analysis and Integration

Submitting, Finding and Downloading Raw Sequencing Data with ENA

UniProt: Focus on Plant Proteins

Enrichment Analysis

Statistics and Machine Learning for Life Sciences

Spatial Omics Data Analysis

Cancer Variant Analysis

NGS - Quality Control, Alignment, Visualisation

Introduction to Bayesian Statistics with R

Enrichment Analysis

First Steps with SQL for Data Science

Long-read Sequence Analysis

NGS - Quality Control, Alignment, Visualisation

Docker and Singularity for Reproducible Research: Getting Started with Containers

First Steps in Parallelization with OpenMP

Snakemake for Reproducible Research: Getting Started with Workflows

Snakemake for Reproducible Research: Getting Started with Workflows